RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CHGBP05060 677 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PDE6AP16499 860 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CCND3P30281 292 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CCL14Q16627 93 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CRACR2BQ8N4Y2 399 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 DEFB123Q8N688 67 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PORCNQ9H237 461 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 DHX36Q9H2U1 1008 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 RBPJLQ9UBG7 517 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PALD1Q9ULE6 856 aa12.99□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ZNF532Q9HCE3 1301 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 BAG3O95817 575 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PLCG2P16885 1265 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 HSPA4P34932 840 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ANAPC15P60006 121 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ERVK-24P63145 666 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 TMED8Q6PL24 325 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 TDHQ8IZJ6 230 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 APBA2Q99767 749 aa12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 UBE2OQ9C0C9 1292 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-202ENST00000374949 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 C19orf81C9J6K1 198 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 M0R2C6 588 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 COL6A1P12109 1028 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MAPK4P31152 587 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 RGS2P41220 211 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 Q3C1V9 767 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 LRIT3Q3SXY7 679 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 KIF2CQ99661 725 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PUS7LQ9H0K6 701 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
HLA-DQA1-202ENST00000374949 GH2P01242 217 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 HLA-DOAP06340 250 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PPP4CP60510 307 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 BECN1Q14457 450 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 NECTIN1Q15223 517 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 RABEP1Q15276 862 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 LRRC26Q2I0M4 334 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 MORN1Q5T089 497 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 METTL16Q86W50 562 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 USP6NLQ92738 828 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 FEZ1Q99689 392 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 CWC22Q9HCG8 908 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 RBM8AQ9Y5S9 174 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-202ENST00000374949 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CYP7A1P22680 504 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MDM2Q00987 491 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 LHX8Q68G74 356 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 FOXP4Q8IVH2 680 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MIGA1Q8NAN2 632 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 KCNB2Q92953 911 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-202ENST00000374949 GPAA1O43292 621 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CNMDO75829 334 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MAP2K5Q13163 448 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 GTF3C2Q8WUA4 911 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MTMR10Q9NXD2 777 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 FLRT1Q9NZU1 646 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 CTNNA3Q9UI47 895 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 STXBP5LQ9Y2K9 1186 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SNX14Q9Y5W7 946 aa12.94□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SLC27A2O14975 620 aa12.93□□□□□ -0.34
HLA-DQA1-202ENST00000374949 GNAT2P19087 354 aa12.93□□□□□ -0.34
HLA-DQA1-202ENST00000374949 VCAM1P19320 739 aa12.93□□□□□ -0.34
HLA-DQA1-202ENST00000374949 SNX21Q969T3 373 aa12.93□□□□□ -0.34
HLA-DQA1-202ENST00000374949 A0A0G2JMZ2 1700 aa12.93□□□□□ -0.34
HLA-DQA1-202ENST00000374949 ZNF236Q9UL36 1845 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 MAGEB6P1A0A0J9YX57 407 aa12.92□□□□□ -0.34
HLA-DQA1-202ENST00000374949 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms