RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 RGS12O14924 1447 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 SPATA31D1Q6ZQQ2 1576 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 CHRNDQ07001 517 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 NLRP10Q86W26 655 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 LEO1Q8WVC0 666 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 ZNF354CQ86Y25 554 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 C17orf53Q8N3J3 647 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 ZDHHC9Q9Y397 364 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 OAS2P29728 719 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 CEP85LQ5SZL2 805 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 MIPOL1Q8TD10 442 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 SECISBP2LQ93073 1101 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 PLIN2Q99541 437 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 PALD1Q9ULE6 856 aa13.67□□□□□ -0.22
NPLOC4-202ENST00000374747 TECPR2O15040 1411 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 TRAF5O00463 557 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 E7EWF7 191 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 CLUL1Q15846 466 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 TSNAXIP1Q2TAA8 658 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 MLKLQ8NB16 471 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 NOX5Q96PH1 765 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 CLGNO14967 610 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 PDE6AP16499 860 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 PPFIA1Q13136 1202 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 RBM26Q5T8P6 1007 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 CABS1Q96KC9 395 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 VCX3BQ9H321 246 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 DBNLQ9UJU6 430 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 LARGE2Q8N3Y3 721 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
NPLOC4-202ENST00000374747 SPOPO43791 374 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 ERCC5P28715 1186 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 RPUSD2Q8IZ73 545 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 POLA2Q14181 598 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 AKNAD1Q5T1N1 836 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 KRT27Q7Z3Y8 459 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 IL25Q9H293 177 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 EPB41P11171 864 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 ZNF174Q15697 407 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 PUS3Q9BZE2 481 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 ARPP21Q9UBL0 812 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 GYG1P46976 350 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 NLRP12P59046 1061 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 CNNM4Q6P4Q7 775 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 TAOK1Q7L7X3 1001 aa13.65□□□□□ -0.22
NPLOC4-202ENST00000374747 BCAMP50895 628 aa13.65□□□□□ -0.23
NPLOC4-202ENST00000374747 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.23
NPLOC4-202ENST00000374747 PDE4DQ08499 809 aa13.65□□□□□ -0.23
NPLOC4-202ENST00000374747 PAK2Q13177 524 aa13.65□□□□□ -0.23
NPLOC4-202ENST00000374747 UBE3CQ15386 1083 aa13.65□□□□□ -0.23
NPLOC4-202ENST00000374747 PPP1R12CQ9BZL4 782 aa13.65□□□□□ -0.23
NPLOC4-202ENST00000374747 CUTAO60888 179 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 PRDM1O75626 825 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 FRMD4BQ9Y2L6 1034 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 SEMA3EO15041 775 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 UAP1Q16222 522 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 H7C1W4 665 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 ZWINTO95229 277 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 TNFAIP3P21580 790 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 PTH1RQ03431 593 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 PAK1Q13153 545 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 VSIG1Q86XK7 387 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 FAM184BQ9ULE4 1060 aa13.64□□□□□ -0.23
NPLOC4-202ENST00000374747 GMNNO75496 209 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.63□□□□□ -0.231e-6■■■■■ 29.6
NPLOC4-202ENST00000374747 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 PPARAQ07869 468 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 MFSD14BQ5SR56 506 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 TMC4Q7Z404 712 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 UBL4BQ8N7F7 174 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 KIFAP3Q92845 792 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 MCUR1Q96AQ8 359 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 NCOA5Q9HCD5 579 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 ASIC2Q16515 512 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 GKAP1Q5VSY0 366 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 ZNF365Q70YC5 407 aa13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-202ENST00000374747 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms