RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 LPAR1Q92633 364 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 WBP1LQ9NX94 342 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 STX8Q9UNK0 236 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 SLC45A1Q9Y2W3 748 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 PCNTO95613 3336 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
HSPG2-202ENST00000374676 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
HSPG2-202ENST00000374676 HOXA7P31268 230 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-202ENST00000374676 MCM5P33992 734 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 ANTXR2P58335 489 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 ANAPC15P60006 121 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
HSPG2-202ENST00000374676 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 GMCL1P1Q8NEA9 526 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 UBAC1Q9BSL1 405 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 CFHR5Q9BXR6 569 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
HSPG2-202ENST00000374676 F5H6K3 240 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 PSMA5P28066 241 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
HSPG2-202ENST00000374676 KLRC3Q07444 240 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 DGKZQ13574 1117 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
HSPG2-202ENST00000374676 SEC23AQ15436 765 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
HSPG2-202ENST00000374676 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 TREML2Q5T2D2 321 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 DHX32Q7L7V1 743 aaKnown RBP13.36□□□□□ -0.27
HSPG2-202ENST00000374676 ENAHQ8N8S7 591 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-202ENST00000374676 IGDCC4Q8TDY8 1250 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 IL17RAQ96F46 866 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 ZKSCAN3Q9BRR0 538 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 TNKSO95271 1327 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 PDHXO00330 501 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 IFIT3O14879 490 aaKnown RBP13.35□□□□□ -0.27
HSPG2-202ENST00000374676 WDR46O15213 610 aaKnown RBP13.35□□□□□ -0.27
HSPG2-202ENST00000374676 CA12O43570 354 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 PRC1O43663 620 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 VCAM1P19320 739 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 CATSPERGQ6ZRH7 1159 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 BEGAINQ9BUH8 593 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 BACH2Q9BYV9 841 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
HSPG2-202ENST00000374676 ERICH2A1L162 156 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 TRPA1O75762 1119 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 NDUFB10O96000 172 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 OSBPP22059 807 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 COL9A3Q14050 684 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-202ENST00000374676 TAF1CQ15572 869 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-202ENST00000374676 CHST3Q7LGC8 479 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 LRRC47Q8N1G4 583 aaKnown RBP13.34□□□□□ -0.27
HSPG2-202ENST00000374676 TMTC2Q8N394 836 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 GMCL1Q96IK5 515 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
HSPG2-202ENST00000374676 RLFQ13129 1914 aa13.34□□□□□ -0.27
HSPG2-202ENST00000374676 LIFRP42702 1097 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 WTAPQ15007 396 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 TMEM67Q5HYA8 995 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
HSPG2-202ENST00000374676 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 SPICE1Q8N0Z3 855 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 PNMA1Q8ND90 353 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 DCAF4Q8WV16 495 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 PARK7Q99497 189 aaKnown RBP13.33□□□□□ -0.28
HSPG2-202ENST00000374676 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-202ENST00000374676 RPAP3Q9H6T3 665 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-202ENST00000374676 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
HSPG2-202ENST00000374676 PARP14Q460N5 1801 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-202ENST00000374676 SNHG28P0DPA3 235 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 BMP3P12645 472 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
HSPG2-202ENST00000374676 RPS6KB1P23443 525 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-202ENST00000374676 COG2Q14746 738 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 NOM1Q5C9Z4 860 aaKnown RBP13.32□□□□□ -0.28
HSPG2-202ENST00000374676 P2RX7Q99572 595 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms