RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 PTPN18Q99952 460 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 USP26Q9BXU7 913 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 EMILIN3Q9NT22 766 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 TCP11L1Q9NUJ3 509 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 RNF186Q9NXI6 227 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 HSPA4P34932 840 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 CTCFP49711 727 aaPredicted RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 TREML2Q5T2D2 321 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 COL13A1Q5TAT6 717 aaPredicted RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 SMCR8Q8TEV9 937 aaPredicted RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 TTC14Q96N46 770 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 PARK7Q99497 189 aaKnown RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 KAT14Q9H8E8 782 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 UPF2Q9HAU5 1272 aaKnown RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
PFDN6-202ENST00000374607 IL17RBQ9NRM6 502 aa17.91■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L15C9J2P7 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L13C9JLJ4 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L11C9JVI0 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L18D6R9N7 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L22D6RA61 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L17D6RBQ6 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L19D6RCP7 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L20D6RJB6 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
PFDN6-202ENST00000374607 PSMA5P28066 241 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 MCM5P33992 734 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 FGD1P98174 961 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 USP17L24Q0WX57 530 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 IFIT1BQ5T764 474 aaKnown RBP17.9■□□□□ 0.46
PFDN6-202ENST00000374607 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
PFDN6-202ENST00000374607 SAGE1Q9NXZ1 904 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 SLC45A1Q9Y2W3 748 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 TAF6LQ9Y6J9 622 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 TNKSO95271 1327 aa17.9■□□□□ 0.46
PFDN6-202ENST00000374607 F5H6K3 240 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 TBC1D8O95759 1140 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
PFDN6-202ENST00000374607 VCAM1P19320 739 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 KLRC3Q07444 240 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 STOX1Q6ZVD7 989 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 CYB5R4Q7L1T6 521 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 MKL1Q969V6 931 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 C12orf42Q96LP6 360 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 JAKMIP1Q96N16 626 aaKnown RBP17.89■□□□□ 0.45
PFDN6-202ENST00000374607 SYNPO2Q9UMS6 1093 aa17.89■□□□□ 0.45
PFDN6-202ENST00000374607 WDR46O15213 610 aaKnown RBP17.88■□□□□ 0.45
PFDN6-202ENST00000374607 PRC1O43663 620 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 IKQ13123 557 aaPredicted RBP17.88■□□□□ 0.45
PFDN6-202ENST00000374607 MOGSQ13724 837 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 WTAPQ15007 396 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 RASEFQ8IZ41 740 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 TSKSQ9UJT2 592 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 SNX14Q9Y5W7 946 aa17.88■□□□□ 0.45
PFDN6-202ENST00000374607 CYP2C8P10632 490 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 SLC1A4P43007 532 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 CRHR2Q13324 411 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 CCDC96Q2M329 555 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 TSGA10IPQ3SY00 556 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 GMCL1P1Q8NEA9 526 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
PFDN6-202ENST00000374607 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
PFDN6-202ENST00000374607 GREB1LQ9C091 1923 aaPredicted RBP17.87■□□□□ 0.45
PFDN6-202ENST00000374607 MYH4Q9Y623 1939 aa17.87■□□□□ 0.45
PFDN6-202ENST00000374607 FLOT1O75955 427 aa17.86■□□□□ 0.45
PFDN6-202ENST00000374607 NDUFB10O96000 172 aa17.86■□□□□ 0.45
PFDN6-202ENST00000374607 HSPA8P11142 646 aaKnown RBP17.86■□□□□ 0.45
PFDN6-202ENST00000374607 HOXA7P31268 230 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-202ENST00000374607 FAM83BQ5T0W9 1011 aa17.86■□□□□ 0.45
PFDN6-202ENST00000374607 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-202ENST00000374607 ENAHQ8N8S7 591 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-202ENST00000374607 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
PFDN6-202ENST00000374607 PTPRFP10586 1907 aa17.86■□□□□ 0.45
PFDN6-202ENST00000374607 CCDC69A6NI79 296 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 LOC285556D6RIA3 1793 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 SEC24BO95487 1268 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 BMP3P12645 472 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
PFDN6-202ENST00000374607 LBX1P52954 281 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 ADCK5Q3MIX3 580 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 CATSPERGQ6ZRH7 1159 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 DHX32Q7L7V1 743 aaKnown RBP17.85■□□□□ 0.45
PFDN6-202ENST00000374607 TMTC2Q8N394 836 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms