RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SRGAP2O75044 1071 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 STX2P32856 288 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
CD28-202ENST00000374481 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD28-202ENST00000374481 TCERG1LQ5VWI1 586 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
CD28-202ENST00000374481 MORC4Q8TE76 937 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 EXOC1Q9NV70 894 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 SERTAD1Q9UHV2 236 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 CALCOCO2Q13137 446 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 ELAC2Q9BQ52 826 aaKnown RBP11.34□□□□□ -0.59
CD28-202ENST00000374481 BPIFA3Q9BQP9 254 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 CNOT10Q9H9A5 744 aaKnown RBP11.34□□□□□ -0.59
CD28-202ENST00000374481 RTEL1-TNFRSF6BF6WH68 1400 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 ATP2A2P16615 1042 aaKnown RBP11.34□□□□□ -0.59
CD28-202ENST00000374481 AMOTQ4VCS5 1084 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 CFAP157Q5JU67 520 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 NFU1Q9UMS0 254 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 BCORL1Q5H9F3 1711 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 ZPR1O75312 459 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 PDHBP11177 359 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 HSP90AA5PQ58FG0 334 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 SYCP3Q8IZU3 236 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 TRIML1Q8N9V2 468 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 NOC4LQ9BVI4 516 aaKnown RBP11.33□□□□□ -0.6
CD28-202ENST00000374481 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
CD28-202ENST00000374481 H0Y3Z8 333 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 IDH1O75874 414 aaKnown RBP11.33□□□□□ -0.6
CD28-202ENST00000374481 CPP00450 1065 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 PLCD1P51178 756 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 SEC24CP53992 1094 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 KRT12Q99456 494 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 RABGAP1Q9Y3P9 1069 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 TPP2P29144 1249 aaPredicted RBP11.33□□□□□ -0.6
CD28-202ENST00000374481 MDH1P40925 334 aaKnown RBP11.33□□□□□ -0.6
CD28-202ENST00000374481 USP5P45974 858 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 RPS6KA1Q15418 735 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 ZC3H18Q86VM9 953 aaKnown RBP11.33□□□□□ -0.6
CD28-202ENST00000374481 AK9Q5TCS8 1911 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
CD28-202ENST00000374481 TARSL2A2RTX5 802 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 AMPD3Q01432 767 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 RILPL1Q5EBL4 403 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 FYB2Q5VWT5 728 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 RSRC2Q7L4I2 434 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 BIN2Q9UBW5 565 aaPredicted RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 BICDL2A1A5D9 508 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 NDUFA10O95299 355 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 CSB-PGBD3P0DP91 1061 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 MTF1Q14872 753 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 MIER3Q7Z3K6 550 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 ENOX1Q8TC92 643 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 GOLPH3LQ9H4A5 285 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 KLC1Q07866 573 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 ARHGAP22Q7Z5H3 698 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 ATP10BO94823 1461 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 BAG2O95816 211 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 CXCR5P32302 372 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 MRPS35P82673 323 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 CCDC93Q567U6 631 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 MSANTD4Q8NCY6 345 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 ATP6V1G3Q96LB4 118 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 DDX23Q9BUQ8 820 aaKnown RBP11.32□□□□□ -0.6
CD28-202ENST00000374481 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 PLAAQ9Y263 795 aa11.32□□□□□ -0.6
CD28-202ENST00000374481 MAP2K7O14733 419 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 MFAP3LO75121 409 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 ANP32DO95626 131 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 ARHGAP18Q8N392 663 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 NAPBQ9H115 298 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 POLR1AO95602 1720 aaPredicted RBP11.31□□□□□ -0.6
CD28-202ENST00000374481 FAM107AO95990 144 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 CHGBP05060 677 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 PECAM1P16284 738 aaPredicted RBP11.31□□□□□ -0.6
CD28-202ENST00000374481 RXRAP19793 462 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
CD28-202ENST00000374481 CETN2P41208 172 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 RAD23BP54727 409 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 GSCP56915 257 aaPredicted RBP11.31□□□□□ -0.6
CD28-202ENST00000374481 SLC9C1Q4G0N8 1177 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 ANKRD13CQ8N6S4 541 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 NOL3O60936 208 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms