RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 UNCXA6NJT0 531 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 PTPRAP18433 802 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 SCRN1Q12765 414 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 TMX2Q9Y320 296 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 CSADQ9Y600 493 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
SMPDL3B-201ENST00000373888 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 RXRAP19793 462 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 LDLRAD1Q5T700 205 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 MOB2Q70IA6 237 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 CCDC84Q86UT8 332 aaPredicted RBP17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 RAB11FIP4Q86YS3 637 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 FANCBQ8NB91 859 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 GMCL1P1Q8NEA9 526 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 NUP133Q8WUM0 1156 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 WDR18Q9BV38 432 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 GBA2Q9HCG7 927 aaPredicted RBP17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
SMPDL3B-201ENST00000373888 SNHG28P0DPA3 235 aa17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 ECE1P42892 770 aa17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 GRM4Q14833 912 aa17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 ACER1Q8TDN7 264 aa17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 INTS4Q96HW7 963 aaKnown RBP17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 AS3MTQ9HBK9 375 aa17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 NCOA5Q9HCD5 579 aaKnown RBP17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 FAM217BQ9NTX9 383 aaPredicted RBP17.07■□□□□ 0.32
SMPDL3B-201ENST00000373888 CCDC196A0A1B0GTZ2 297 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 TOMM70O94826 608 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 PDHBP11177 359 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 RTN1Q16799 776 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CCDC144CPQ8IYA2 1237 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 C2orf69Q8N8R5 385 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 RBM28Q9NW13 759 aaKnown RBP17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CHMP5Q9NZZ3 219 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 PHIPQ8WWQ0 1821 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CDC27P30260 824 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 KIF5BP33176 963 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CST9Q5W186 159 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 CLMNQ96JQ2 1002 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 TRPM7Q96QT4 1865 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 GOPCQ9HD26 462 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 MAD2L2Q9UI95 211 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 ZHX2Q9Y6X8 837 aa17.06■□□□□ 0.32
SMPDL3B-201ENST00000373888 F5H6K3 240 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 KLRC3Q07444 240 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 NBR1Q14596 966 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 NTRK3Q16288 839 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 SLFN13Q68D06 897 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 ERO1BQ86YB8 467 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 DCAF4Q8WV16 495 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 AFG3L2Q9Y4W6 797 aa17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
SMPDL3B-201ENST00000373888 PALM3A6NDB9 673 aaPredicted RBP17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 SPDYE5A6NIY4 337 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 USP17L10C9JJH3 530 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 NDUFB10O96000 172 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 BACE1P56817 501 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 PPATQ06203 517 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 FEZ1Q99689 392 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 ELP3Q9H9T3 547 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
SMPDL3B-201ENST00000373888 CPLX1O14810 134 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 GNAQP50148 359 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 USP14P54578 494 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 SPP2Q13103 211 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 NFKBIBQ15653 356 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 USP17L2Q6R6M4 530 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 TMTC3Q6ZXV5 915 aa17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 NSUN7Q8NE18 718 aaKnown RBP17.03■□□□□ 0.32
SMPDL3B-201ENST00000373888 CDKL5O76039 1030 aa17.02■□□□□ 0.32
SMPDL3B-201ENST00000373888 IFNAR1P17181 557 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms