RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 FAM182BQ5T319 152 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 SOGA3Q5TF21 947 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 FAM196AQ6ZSG2 479 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CACNA2D4Q7Z3S7 1137 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 EXOC4Q96A65 974 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 STK38LQ9Y2H1 464 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 OPHN1O60890 802 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 NKX1-1Q15270 411 aaPredicted RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CCDC43Q96MW1 224 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 CNNM2Q9H8M5 875 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 ZNF287Q9HBT7 754 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CTDP1Q9Y5B0 961 aaPredicted RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 MBD4O95243 580 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CLTAP09496 248 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 KCNQ4P56696 695 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 PHLDB3Q6NSJ2 640 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 IFT81Q8WYA0 676 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 PKD1L3Q7Z443 1732 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 ACTN2P35609 894 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 RASIP1Q5U651 963 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CATIPQ7Z7H3 387 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 AOPEPQ8N6M6 819 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 THEGQ9P2T0 379 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 SPATA31A6Q5VVP1 1343 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 MYH8P13535 1937 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 SPEF2Q9C093 1822 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 ZNF772Q68DY9 489 aaPredicted RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 GPR161Q8N6U8 529 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 BRF1Q92994 677 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 INTS4Q96HW7 963 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 C8orf76Q96K31 380 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 RAB3IPQ96QF0 476 aaPredicted RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 DNAJC25Q9H1X3 360 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 JAG2Q9Y219 1238 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 KRT18P05783 430 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 LDHCP07864 332 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 RPS6KB1P23443 525 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 CERKQ8TCT0 537 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CENPKQ9BS16 269 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 LZTFL1Q9NQ48 299 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CHCHD3Q9NX63 227 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 ERCC6LQ2NKX8 1250 aa7.34□□□□□ -1.24
CHD6-203ENST00000373233 CCDC62Q6P9F0 684 aa7.34□□□□□ -1.24
CHD6-203ENST00000373233 MICU3Q86XE3 530 aa7.34□□□□□ -1.24
CHD6-203ENST00000373233 BAZ2BQ9UIF8 2168 aaKnown RBP7.34□□□□□ -1.24
CHD6-203ENST00000373233 TUBB2AQ13885 445 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 KARSQ15046 597 aaKnown RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 HLFQ16534 295 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 GKAP1Q5VSY0 366 aaPredicted RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 BAG1Q99933 345 aaPredicted RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 TUBB2BQ9BVA1 445 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 TMOD2Q9NZR1 351 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 DENND2AQ9ULE3 1009 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 GFAPP14136 432 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 MIGA1Q8NAN2 632 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 SPECC1L-ADORA2AF8WAN1 911 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 CCDC110Q8TBZ0 833 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 LSG1Q9H089 658 aaKnown RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 PPP1R9AQ9ULJ8 1098 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 CEP131Q9UPN4 1083 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 CDHR2Q9BYE9 1310 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 RTL9Q8NET4 1388 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 hCG_2014768A0A024R1R8 64 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 METAP2P50579 478 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD6-203ENST00000373233 HNRNPH2P55795 449 aaKnown RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 STK32BQ9NY57 414 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 IKBKGQ9Y6K9 419 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 MYH7P12883 1935 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 N4BP2Q86UW6 1770 aaPredicted RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 KLF18A0A0U1RQI7 1052 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PRR16Q569H4 304 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 EDC3Q96F86 508 aaKnown RBP7.33□□□□□ -1.24
CHD6-203ENST00000373233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD6-203ENST00000373233 NKIRAS1Q9NYS0 192 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 ZNF75DP51815 510 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 ERFEQ4G0M1 354 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 GPR108Q9NPR9 543 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PALD1Q9ULE6 856 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PRC1O43663 620 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PTH1RQ03431 593 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PDIA6Q15084 440 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 USPL1Q5W0Q7 1092 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 SCOCQ9UIL1 159 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 MACROD2A1Z1Q3 448 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 GPAA1O43292 621 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 TRIM37O94972 964 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PDE4BQ07343 736 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 PI4K2BQ8TCG2 481 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 NUF2Q9BZD4 464 aa7.33□□□□□ -1.24
CHD6-203ENST00000373233 ZAP70P43403 619 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 IKQ13123 557 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 SREK1Q8WXA9 508 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 PPP1R12AO14974 1030 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 LDHBP07195 334 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms