RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 C17orf99Q6UX52 265 aa17.76■□□□□ 0.43
SNX21-203ENST00000372541 NEDD1Q8NHV4 660 aa17.76■□□□□ 0.43
SNX21-203ENST00000372541 IGKV6D-41A0A0C4DH26 115 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
SNX21-203ENST00000372541 FGRP09769 529 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
SNX21-203ENST00000372541 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
SNX21-203ENST00000372541 AKNAD1Q5T1N1 836 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 SIAH1Q8IUQ4 282 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 STAG1Q8WVM7 1258 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 LPAR1Q92633 364 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 ZNF333Q96JL9 665 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 VCPKMTQ9H867 229 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 NYAP2Q9P242 653 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 LAMA4Q16363 1823 aa17.75■□□□□ 0.43
SNX21-203ENST00000372541 USP17L15C9J2P7 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L13C9JLJ4 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L11C9JVI0 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L18D6R9N7 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L22D6RA61 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L17D6RBQ6 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L19D6RCP7 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L20D6RJB6 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 CDC45O75419 566 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 BCRP11274 1271 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
SNX21-203ENST00000372541 LACTBP83111 547 aaPredicted RBP17.74■□□□□ 0.43
SNX21-203ENST00000372541 USP17L24Q0WX57 530 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 KIF22Q14807 665 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 TMEM106CQ9BVX2 250 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 RPAP3Q9H6T3 665 aaPredicted RBP17.74■□□□□ 0.43
SNX21-203ENST00000372541 INCENPQ9NQS7 918 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 MTMR4Q9NYA4 1195 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
SNX21-203ENST00000372541 RAD21O60216 631 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 TTLL1O95922 423 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 KIAA1211Q6ZU35 1233 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 SPICE1Q8N0Z3 855 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 GTF3C2Q8WUA4 911 aaPredicted RBP17.73■□□□□ 0.43
SNX21-203ENST00000372541 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 TANGO6Q9C0B7 1094 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
SNX21-203ENST00000372541 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
SNX21-203ENST00000372541 NEDD4P46934 1319 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 RBBP6Q7Z6E9 1792 aaKnown RBP17.72■□□□□ 0.43
SNX21-203ENST00000372541 NT5C2P49902 561 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 HERVK_113P62684 666 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 PTH1RQ03431 593 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 FAM110CQ1W6H9 321 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 CATSPERGQ6ZRH7 1159 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 ANKRD13CQ8N6S4 541 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 ESR2Q92731 530 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 SYNPO2Q9UMS6 1093 aa17.72■□□□□ 0.43
SNX21-203ENST00000372541 COLQQ9Y215 455 aaPredicted RBP17.72■□□□□ 0.43
SNX21-203ENST00000372541 WDR46O15213 610 aaKnown RBP17.71■□□□□ 0.43
SNX21-203ENST00000372541 KIAA1755Q5JYT7 1200 aa17.71■□□□□ 0.43
SNX21-203ENST00000372541 P2RX7Q99572 595 aaKnown RBP17.71■□□□□ 0.43
SNX21-203ENST00000372541 STX8Q9UNK0 236 aa17.71■□□□□ 0.43
SNX21-203ENST00000372541 NBPF11Q86T75 865 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
SNX21-203ENST00000372541 MAP4K1Q92918 833 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 MKL1Q969V6 931 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 ARHGAP39Q9C0H5 1083 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 PTCH2Q9Y6C5 1203 aa17.7■□□□□ 0.42
SNX21-203ENST00000372541 KIAA0100Q14667 2235 aaKnown RBP17.7■□□□□ 0.42
SNX21-203ENST00000372541 NMT2O60551 498 aa17.69■□□□□ 0.42
SNX21-203ENST00000372541 ECM2O94769 699 aaPredicted RBP17.69■□□□□ 0.42
SNX21-203ENST00000372541 FCGRTP55899 365 aa17.69■□□□□ 0.42
SNX21-203ENST00000372541 PAGR1Q9BTK6 254 aa17.69■□□□□ 0.42
SNX21-203ENST00000372541 KRT23Q9C075 422 aa17.69■□□□□ 0.42
SNX21-203ENST00000372541 LSG1Q9H089 658 aaKnown RBP17.69■□□□□ 0.42
SNX21-203ENST00000372541 IL17RBQ9NRM6 502 aa17.69■□□□□ 0.42
SNX21-203ENST00000372541 SPDYE16A6NNV3 312 aaPredicted RBP17.68■□□□□ 0.42
SNX21-203ENST00000372541 F5H6K3 240 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 KDM4AO75164 1064 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 FLOT1O75955 427 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
SNX21-203ENST00000372541 NDUFB10O96000 172 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 GNRH1P01148 92 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 CYP21A2P08686 494 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 PSMC4P43686 418 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 KLRC3Q07444 240 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 COG2Q14746 738 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 SLC9C1Q4G0N8 1177 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 FAM83BQ5T0W9 1011 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 GMCL1P1Q8NEA9 526 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 TCP11L1Q9NUJ3 509 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 RBM8AQ9Y5S9 174 aaKnown RBP17.68■□□□□ 0.42
SNX21-203ENST00000372541 SZT2Q5T011 3432 aa17.68■□□□□ 0.42
SNX21-203ENST00000372541 TRDNQ13061 729 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms