RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PFKFB2O60825 505 aa18.52■□□□□ 0.56
TMEM53-204ENST00000372243 FSTL1Q12841 308 aa18.52■□□□□ 0.56
TMEM53-204ENST00000372243 CST9Q5W186 159 aa18.52■□□□□ 0.56
TMEM53-204ENST00000372243 MOB2Q70IA6 237 aa18.52■□□□□ 0.56
TMEM53-204ENST00000372243 GMCL1P1Q8NEA9 526 aa18.52■□□□□ 0.56
TMEM53-204ENST00000372243 HPS5Q9UPZ3 1129 aa18.52■□□□□ 0.56
TMEM53-204ENST00000372243 A0A1W2PRG0 241 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 GOLGA8BA8MQT2 603 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 LARGE1O95461 756 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 ATP2B2Q01814 1243 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 SLKQ9H2G2 1235 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-204ENST00000372243 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-204ENST00000372243 UBE2Q2LH0YL09 131 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM53-204ENST00000372243 PPATQ06203 517 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 MICU3Q86XE3 530 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 ERO1BQ86YB8 467 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 LRRC47Q8N1G4 583 aaKnown RBP18.51■□□□□ 0.55
TMEM53-204ENST00000372243 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 ACER1Q8TDN7 264 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 GTF3C6Q969F1 213 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 ZHX2Q9Y6X8 837 aa18.51■□□□□ 0.55
TMEM53-204ENST00000372243 SPDYE5A6NIY4 337 aa18.5■□□□□ 0.55
TMEM53-204ENST00000372243 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
TMEM53-204ENST00000372243 ECE1P42892 770 aa18.5■□□□□ 0.55
TMEM53-204ENST00000372243 CUL4AQ13619 759 aa18.5■□□□□ 0.55
TMEM53-204ENST00000372243 FANCBQ8NB91 859 aa18.5■□□□□ 0.55
TMEM53-204ENST00000372243 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
TMEM53-204ENST00000372243 AFG3L2Q9Y4W6 797 aa18.5■□□□□ 0.55
TMEM53-204ENST00000372243 CCDC196A0A1B0GTZ2 297 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 F5H6K3 240 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 DHX16O60231 1041 aaKnown RBP18.49■□□□□ 0.55
TMEM53-204ENST00000372243 KIF5BP33176 963 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 USP14P54578 494 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 KLRC3Q07444 240 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 SCRN1Q12765 414 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 STK3Q13188 491 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 CCDC84Q86UT8 332 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-204ENST00000372243 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-204ENST00000372243 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 CLMNQ96JQ2 1002 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 VCPKMTQ9H867 229 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 GOPCQ9HD26 462 aa18.49■□□□□ 0.55
TMEM53-204ENST00000372243 RBM28Q9NW13 759 aaKnown RBP18.49■□□□□ 0.55
TMEM53-204ENST00000372243 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
TMEM53-204ENST00000372243 PDHBP11177 359 aa18.48■□□□□ 0.55
TMEM53-204ENST00000372243 GRM4Q14833 912 aa18.48■□□□□ 0.55
TMEM53-204ENST00000372243 DCAF4Q8WV16 495 aa18.48■□□□□ 0.55
TMEM53-204ENST00000372243 GMCL1Q96IK5 515 aa18.48■□□□□ 0.55
TMEM53-204ENST00000372243 RXRAP19793 462 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 BACE1P56817 501 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 CCT2P78371 535 aaKnown RBP18.47■□□□□ 0.55
TMEM53-204ENST00000372243 SPP2Q13103 211 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 RTN1Q16799 776 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 NECAB1Q8N987 351 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 LPAR1Q92633 364 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 SLC10A4Q96EP9 437 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 INTS4Q96HW7 963 aaKnown RBP18.47■□□□□ 0.55
TMEM53-204ENST00000372243 FEZ1Q99689 392 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 FAM217BQ9NTX9 383 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-204ENST00000372243 PALM3A6NDB9 673 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-204ENST00000372243 GNAQP50148 359 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 ST3GAL1Q11201 340 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 PPIL2Q13356 520 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 SH3D19Q5HYK7 790 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 GPATCH4Q5T3I0 446 aaKnown RBP18.47■□□□□ 0.55
TMEM53-204ENST00000372243 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 C12orf42Q96LP6 360 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 MAD2L2Q9UI95 211 aa18.47■□□□□ 0.55
TMEM53-204ENST00000372243 CXCL11O14625 94 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 NDUFB10O96000 172 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
TMEM53-204ENST00000372243 CDC27P30260 824 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 USP17L2Q6R6M4 530 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 RAB11FIP4Q86YS3 637 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 CCDC144CPQ8IYA2 1237 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
TMEM53-204ENST00000372243 KCNH4Q9UQ05 1017 aa18.46■□□□□ 0.55
TMEM53-204ENST00000372243 SMARCA1P28370 1054 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 ADD1P35611 737 aaKnown RBP18.45■□□□□ 0.54
TMEM53-204ENST00000372243 SLC1A4P43007 532 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 HUNKP57058 714 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 ZNF543Q08ER8 600 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 MTMR2Q13614 643 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 CPLX2Q6PUV4 134 aaKnown RBP18.45■□□□□ 0.54
TMEM53-204ENST00000372243 SAPCD2Q86UD0 394 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 OPTNQ96CV9 577 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
TMEM53-204ENST00000372243 LZTS2Q9BRK4 669 aa18.45■□□□□ 0.54
TMEM53-204ENST00000372243 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
TMEM53-204ENST00000372243 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.45■□□□□ 0.54
TMEM53-204ENST00000372243 PTPRFP10586 1907 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms