RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 FIBPO43427 364 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 RBM10P98175 930 aaKnown RBP21.42■■□□□ 1.02
VEGFA-206ENST00000372077 RTN1Q16799 776 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 TMEM179Q6ZVK1 233 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 MIGA2Q7L4E1 593 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 CCDC144CPQ8IYA2 1237 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 NUP133Q8WUM0 1156 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 GUCY1A2P33402 732 aa21.41■■□□□ 1.02
VEGFA-206ENST00000372077 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
VEGFA-206ENST00000372077 HSP90AA2PQ14568 343 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-206ENST00000372077 CCDC196A0A1B0GTZ2 297 aa21.41■■□□□ 1.02
VEGFA-206ENST00000372077 PTPDC1A2A3K4 754 aa21.41■■□□□ 1.02
VEGFA-206ENST00000372077 MSNP26038 577 aaKnown RBP21.41■■□□□ 1.02
VEGFA-206ENST00000372077 JAG1P78504 1218 aa21.41■■□□□ 1.02
VEGFA-206ENST00000372077 SHROOM1Q2M3G4 852 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-206ENST00000372077 NBPF12Q5TAG4 269 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-206ENST00000372077 IQCA1LA6NCM1 817 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 CPLX1O14810 134 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 GDF11O95390 407 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 TTLL1O95922 423 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 CCDC173Q0VFZ6 552 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 USP48Q86UV5 1035 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 ZC3H15Q8WU90 426 aaKnown RBP21.4■■□□□ 1.02
VEGFA-206ENST00000372077 KANSL2Q9H9L4 492 aa21.4■■□□□ 1.02
VEGFA-206ENST00000372077 TAF1DQ9H5J8 278 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-206ENST00000372077 RBM28Q9NW13 759 aaKnown RBP21.4■■□□□ 1.02
VEGFA-206ENST00000372077 FAM173BQ6P4H8 233 aa21.39■■□□□ 1.02
VEGFA-206ENST00000372077 CPLX2Q6PUV4 134 aaKnown RBP21.39■■□□□ 1.02
VEGFA-206ENST00000372077 CABP5Q9NP86 173 aa21.39■■□□□ 1.02
VEGFA-206ENST00000372077 NYAP2Q9P242 653 aa21.39■■□□□ 1.02
VEGFA-206ENST00000372077 PHF20L1A8MW92 1017 aa21.39■■□□□ 1.01
VEGFA-206ENST00000372077 SEPT2Q15019 361 aa21.39■■□□□ 1.01
VEGFA-206ENST00000372077 MKL1Q969V6 931 aa21.39■■□□□ 1.01
VEGFA-206ENST00000372077 HOOK2Q96ED9 719 aa21.39■■□□□ 1.01
VEGFA-206ENST00000372077 CDKL5O76039 1030 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 GH2P01242 217 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 FDPSP14324 419 aaKnown RBP21.38■■□□□ 1.01
VEGFA-206ENST00000372077 IFNAR1P17181 557 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 CLEC10AQ8IUN9 316 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 DCPSQ96C86 337 aaKnown RBP21.38■■□□□ 1.01
VEGFA-206ENST00000372077 CLIP2Q9UDT6 1046 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 POLR2AP24928 1970 aaKnown RBP21.38■■□□□ 1.01
VEGFA-206ENST00000372077 CAP2P40123 477 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 FERMT3Q86UX7 667 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 SIAH1Q8IUQ4 282 aa21.38■■□□□ 1.01
VEGFA-206ENST00000372077 BRD1O95696 1058 aa21.37■■□□□ 1.01
VEGFA-206ENST00000372077 GRM4Q14833 912 aa21.37■■□□□ 1.01
VEGFA-206ENST00000372077 DDX11Q96FC9 970 aa21.37■■□□□ 1.01
VEGFA-206ENST00000372077 R3HCC1Q9Y3T6 440 aaKnown RBP21.37■■□□□ 1.01
VEGFA-206ENST00000372077 SYT1P21579 422 aa21.37■■□□□ 1.01
VEGFA-206ENST00000372077 DCAF15Q66K64 600 aa21.37■■□□□ 1.01
VEGFA-206ENST00000372077 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-206ENST00000372077 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-206ENST00000372077 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 EEF2P13639 858 aaKnown RBP21.36■■□□□ 1.01
VEGFA-206ENST00000372077 PDIA4P13667 645 aaKnown RBP21.36■■□□□ 1.01
VEGFA-206ENST00000372077 ZNF445P59923 1031 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 CLEC17AQ6ZS10 378 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 NBPF11Q86T75 865 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 ZBTB21Q9ULJ3 1066 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 PTMAP06454 111 aaKnown RBP21.36■■□□□ 1.01
VEGFA-206ENST00000372077 PDCP20941 246 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 FUT2Q10981 343 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 PRAMEF18Q5VWM3 479 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 ZNF112Q9UJU3 913 aa21.36■■□□□ 1.01
VEGFA-206ENST00000372077 STK36Q9NRP7 1315 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 VPS37CA5D8V6 355 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-206ENST00000372077 PTMSP20962 102 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 KIF5BP33176 963 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 ICA1Q05084 483 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 LARP1BQ659C4 914 aaKnown RBP21.35■■□□□ 1.01
VEGFA-206ENST00000372077 TMTC3Q6ZXV5 915 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 PNMA8AQ86V59 439 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-206ENST00000372077 C17orf53Q8N3J3 647 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-206ENST00000372077 GINM1Q9NU53 330 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 ORC3Q9UBD5 711 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-206ENST00000372077 FOSBP53539 338 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 SUPT20HL1Q3ZLR7 823 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 SULF1Q8IWU6 871 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 LRRC47Q8N1G4 583 aaKnown RBP21.35■■□□□ 1.01
VEGFA-206ENST00000372077 FAM184AQ8NB25 1140 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 ZNF341Q9BYN7 854 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 MAD2L2Q9UI95 211 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 KIF3AQ9Y496 699 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 MYH4Q9Y623 1939 aa21.35■■□□□ 1.01
VEGFA-206ENST00000372077 SSC5DA1L4H1 1573 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 PALM3A6NDB9 673 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-206ENST00000372077 STX6O43752 255 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 FMNL1O95466 1100 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-206ENST00000372077 SNHG28P0DPA3 235 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 ZSCAN30Q86W11 494 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 PLEKHA8P1O95397 391 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 PHKBQ93100 1093 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 SYNPO2Q9UMS6 1093 aa21.34■■□□□ 1.01
VEGFA-206ENST00000372077 CTNND1O60716 968 aaKnown RBP21.33■■□□□ 1.01
VEGFA-206ENST00000372077 SSRP1Q08945 709 aaKnown RBP21.33■■□□□ 1.01
VEGFA-206ENST00000372077 PDHBP11177 359 aa21.33■■□□□ 1.01
VEGFA-206ENST00000372077 GNAQP50148 359 aa21.33■■□□□ 1.01
VEGFA-206ENST00000372077 LRSAM1Q6UWE0 723 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms