RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 INPP5BP32019 993 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 LIFRP42702 1097 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 VGLL4Q14135 290 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 MB21D2Q8IYB1 491 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-204ENST00000368640 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 NBPF3Q9H094 633 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 PDRG1Q9NUG6 133 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
LAMA4-204ENST00000368640 SPDYE5A6NIY4 337 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 USP17L10C9JJH3 530 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 PTPRAP18433 802 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 NEK4P51957 841 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
LAMA4-204ENST00000368640 SEPT2Q15019 361 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 RGMBQ6NW40 437 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 STOX1Q6ZVD7 989 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 ZNF280CQ8ND82 737 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 ZKSCAN4Q969J2 545 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-204ENST00000368640 ZIC5Q96T25 663 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 WDR18Q9BV38 432 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 MTMR4Q9NYA4 1195 aa13.75□□□□□ -0.21
LAMA4-204ENST00000368640 MYH4Q9Y623 1939 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 CXCL11O14625 94 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 KIF5BP33176 963 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 ZNF157P51786 506 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-204ENST00000368640 PPIL2Q13356 520 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
LAMA4-204ENST00000368640 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-204ENST00000368640 FASTKD5Q7L8L6 764 aaKnown RBP13.74□□□□□ -0.21
LAMA4-204ENST00000368640 LPAR1Q92633 364 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 ALDH8A1Q9H2A2 487 aaPredicted RBP13.74□□□□□ -0.21
LAMA4-204ENST00000368640 ELP3Q9H9T3 547 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 CLIP2Q9UDT6 1046 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 OTOFQ9HC10 1997 aa13.74□□□□□ -0.21
LAMA4-204ENST00000368640 GREB1LQ9C091 1923 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 EEF2P13639 858 aaKnown RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 GTF2A2P52657 109 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 RCAN1P53805 252 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 INHBEP58166 350 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 RCSD1Q6JBY9 416 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 CTCFLQ8NI51 663 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 ANKS1AQ92625 1134 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 MKL1Q969V6 931 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 OPTNQ96CV9 577 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 ZSCAN31Q96LW9 406 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
LAMA4-204ENST00000368640 SNCAIPQ9Y6H5 919 aa13.73□□□□□ -0.21
LAMA4-204ENST00000368640 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 SH2B2O14492 632 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-204ENST00000368640 RAD21O60216 631 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 DDAH1O94760 285 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 GNAQP50148 359 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 EXOSC10Q01780 885 aaKnown RBP13.72□□□□□ -0.21
LAMA4-204ENST00000368640 SREBF2Q12772 1141 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 GPATCH4Q5T3I0 446 aaKnown RBP13.72□□□□□ -0.21
LAMA4-204ENST00000368640 Q6ZUG5 572 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 PNMA1Q8ND90 353 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 MAP3K14Q99558 947 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 KIAA1683Q9H0B3 1180 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
LAMA4-204ENST00000368640 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
LAMA4-204ENST00000368640 TMX2Q9Y320 296 aa13.72□□□□□ -0.21
LAMA4-204ENST00000368640 MANSC4A6NHS7 340 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-204ENST00000368640 ZBTB43O43298 467 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 CETPP11597 493 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 BACE1P56817 501 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 SPP2Q13103 211 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 BECN1Q14457 450 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 CYB5R4Q7L1T6 521 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 CHST3Q7LGC8 479 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 ENAHQ8N8S7 591 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-204ENST00000368640 PROCA1Q8NCQ7 364 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-204ENST00000368640 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 DCAF4Q8WV16 495 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 BRF1Q92994 677 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 VCPKMTQ9H867 229 aa13.71□□□□□ -0.21
LAMA4-204ENST00000368640 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
LAMA4-204ENST00000368640 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms