RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NOP9Q86U38 636 aaKnown RBP10.51□□□□□ -0.73
TPM3-213ENST00000368545 SYNE4Q8N205 404 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 C2orf69Q8N8R5 385 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 CCDC8Q9H0W5 538 aaPredicted RBP10.51□□□□□ -0.73
TPM3-213ENST00000368545 GREM2Q9H772 168 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
TPM3-213ENST00000368545 COL11A2P13942 1736 aaPredicted RBP10.51□□□□□ -0.73
TPM3-213ENST00000368545 GRM1Q13255 1194 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 INTS6LQ5JSJ4 861 aaKnown RBP10.51□□□□□ -0.73
TPM3-213ENST00000368545 EVI5LQ96CN4 794 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.51□□□□□ -0.73
TPM3-213ENST00000368545 EPB41L2O43491 1005 aaKnown RBP10.5□□□□□ -0.73
TPM3-213ENST00000368545 CHMLP26374 656 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 EMP3P54852 163 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 FKBP1BP68106 108 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 SH3BP2P78314 561 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM3-213ENST00000368545 ENOX2Q16206 610 aaKnown RBP10.5□□□□□ -0.73
TPM3-213ENST00000368545 LRRC24Q50LG9 513 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 ANKRD13AQ8IZ07 590 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 TLR7Q9NYK1 1049 aaKnown RBP10.5□□□□□ -0.73
TPM3-213ENST00000368545 DBNLQ9UJU6 430 aaKnown RBP10.5□□□□□ -0.73
TPM3-213ENST00000368545 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.5□□□□□ -0.73
TPM3-213ENST00000368545 ABCC12Q96J65 1359 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
TPM3-213ENST00000368545 PNMA6FA0A0J9YX94 578 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 HIP1O00291 1037 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 INHAP05111 366 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 ATP5JP18859 108 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 DNAJA1P31689 397 aaKnown RBP10.49□□□□□ -0.73
TPM3-213ENST00000368545 CCDC144BQ3MJ40 725 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 TBC1D9BQ66K14 1250 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 LDHAL6AQ6ZMR3 332 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 C2orf49Q9BVC5 232 aaPredicted RBP10.49□□□□□ -0.73
TPM3-213ENST00000368545 ETNK1Q9HBU6 452 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.49□□□□□ -0.73
TPM3-213ENST00000368545 RFX7Q2KHR2 1363 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 KLRG2A4D1S0 409 aaPredicted RBP10.49□□□□□ -0.73
TPM3-213ENST00000368545 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 HCLS1P14317 486 aaPredicted RBP10.49□□□□□ -0.73
TPM3-213ENST00000368545 BECN1Q14457 450 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 CNBD1Q8NA66 436 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 SUPT20HQ8NEM7 779 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 SLC6A16Q9GZN6 736 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 A0A1B0GUL6 1792 aa10.49□□□□□ -0.73
TPM3-213ENST00000368545 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 TICAM2Q86XR7 235 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 RUFY2Q8WXA3 655 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 PUS3Q9BZE2 481 aaKnown RBP10.48□□□□□ -0.73
TPM3-213ENST00000368545 CNNM1Q9NRU3 951 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 A0A1B0GUL7 405 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
TPM3-213ENST00000368545 METTL24Q5JXM2 366 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 SLC10A5Q5PT55 438 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 PRR5LQ6MZQ0 368 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 TPTE2Q6XPS3 522 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 NBPF5PQ86XG9 351 aaPredicted RBP10.48□□□□□ -0.73
TPM3-213ENST00000368545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM3-213ENST00000368545 GMLQ99445 158 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
TPM3-213ENST00000368545 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
TPM3-213ENST00000368545 MAP4K4O95819 1239 aaPredicted RBP10.47□□□□□ -0.73
TPM3-213ENST00000368545 IGHMBP2P38935 993 aaKnown RBP10.47□□□□□ -0.73
TPM3-213ENST00000368545 HUNKP57058 714 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 KIF23Q02241 960 aaPredicted RBP10.47□□□□□ -0.73
TPM3-213ENST00000368545 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
TPM3-213ENST00000368545 NEUROD6Q96NK8 337 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 MPHOSPH8Q99549 860 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 USP26Q9BXU7 913 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 POLIQ9UNA4 740 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 RAD50Q92878 1312 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 SLX4Q8IY92 1834 aa10.47□□□□□ -0.73
TPM3-213ENST00000368545 FOXK2Q01167 660 aa10.46□□□□□ -0.73
TPM3-213ENST00000368545 ARHGEF6Q15052 776 aa10.46□□□□□ -0.73
TPM3-213ENST00000368545 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
TPM3-213ENST00000368545 HAUS7Q99871 368 aa10.46□□□□□ -0.73
TPM3-213ENST00000368545 BOLA2Q9H3K6 86 aa10.46□□□□□ -0.73
TPM3-213ENST00000368545 GPRC5DQ9NZD1 345 aa10.46□□□□□ -0.73
TPM3-213ENST00000368545 FCF1Q9Y324 198 aaKnown RBP10.46□□□□□ -0.73
TPM3-213ENST00000368545 FAM155AB1AL88 458 aaPredicted RBP10.46□□□□□ -0.74
TPM3-213ENST00000368545 NPHP1O15259 732 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 SGSM2O43147 1006 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 PDE8BO95263 885 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 ALDH1A1P00352 501 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 CTSHP09668 335 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 MCCP23508 829 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 GNA15P30679 374 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 GNL2Q13823 731 aaKnown RBP10.46□□□□□ -0.74
TPM3-213ENST00000368545 ATP2B3Q16720 1220 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 CCDC158Q5M9N0 1113 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 VGLL2Q8N8G2 317 aa10.46□□□□□ -0.74
TPM3-213ENST00000368545 SCHIP1Q9P0W5 487 aaPredicted RBP10.46□□□□□ -0.74
TPM3-213ENST00000368545 TIMM10P62072 90 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms