RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00272-201ENST00000367563 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 SH3RF3Q8TEJ3 882 aaPredicted RBP10.64□□□□□ -0.71
LINC00272-201ENST00000367563 USP6NLQ92738 828 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 DNAJC2Q99543 621 aaKnown RBP10.64□□□□□ -0.71
LINC00272-201ENST00000367563 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 PORCNQ9H237 461 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 RWDD1Q9H446 243 aaPredicted RBP10.64□□□□□ -0.71
LINC00272-201ENST00000367563 ECHDC1Q9NTX5 307 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 UNC80Q8N2C7 3258 aa10.64□□□□□ -0.71
LINC00272-201ENST00000367563 COL2A1P02458 1487 aaPredicted RBP10.63□□□□□ -0.71
LINC00272-201ENST00000367563 PTPRFP10586 1907 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 BAG3O95817 575 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 XRCC5P13010 732 aaKnown RBP10.63□□□□□ -0.71
LINC00272-201ENST00000367563 ZKSCAN1P17029 563 aaPredicted RBP10.63□□□□□ -0.71
LINC00272-201ENST00000367563 ATP5JP18859 108 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 BACE1P56817 501 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 HERVK_113P62684 666 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 WDR18Q9BV38 432 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00272-201ENST00000367563 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 NDUFB9Q9Y6M9 179 aa10.63□□□□□ -0.71
LINC00272-201ENST00000367563 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 GOLIM4O00461 696 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 ERC2O15083 957 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 SMARCA5O60264 1052 aaPredicted RBP10.62□□□□□ -0.71
LINC00272-201ENST00000367563 GDF11O95390 407 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 HOXA7P31268 230 aaPredicted RBP10.62□□□□□ -0.71
LINC00272-201ENST00000367563 MORN1Q5T089 497 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 GPR142Q7Z601 462 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 OXER1Q8TDS5 423 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
LINC00272-201ENST00000367563 SOCS4Q8WXH5 440 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 HAUS7Q99871 368 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 PAGR1Q9BTK6 254 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 AS3MTQ9HBK9 375 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 PIH1D3Q9NQM4 214 aaKnown RBP10.62□□□□□ -0.71
LINC00272-201ENST00000367563 PAG1Q9NWQ8 432 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 TMOD4Q9NZQ9 345 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 FLRT1Q9NZU1 646 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 PLXNB2O15031 1838 aa10.62□□□□□ -0.71
LINC00272-201ENST00000367563 TTC41PQ6P2S7 1318 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 SNPHO15079 494 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 ERVK-24P63145 666 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 ADGRA1Q86SQ6 560 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 MAPKAPK5Q8IW41 473 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 MAGEB6Q8N7X4 407 aa10.61□□□□□ -0.71
LINC00272-201ENST00000367563 SENP6Q9GZR1 1112 aaPredicted RBP10.61□□□□□ -0.71
LINC00272-201ENST00000367563 HERC5Q9UII4 1024 aaKnown RBP10.61□□□□□ -0.71
LINC00272-201ENST00000367563 SPDYE16A6NNV3 312 aaPredicted RBP10.6□□□□□ -0.71
LINC00272-201ENST00000367563 DPYSL4O14531 572 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 CNMDO75829 334 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 MX1P20591 662 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 CYP7A1P22680 504 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 MAPK4P31152 587 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 RGS2P41220 211 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 LRRFIP1Q32MZ4 808 aaKnown RBP10.6□□□□□ -0.71
LINC00272-201ENST00000367563 FAM109BQ6ICB4 259 aaPredicted RBP10.6□□□□□ -0.71
LINC00272-201ENST00000367563 ZSCAN25Q6NSZ9 544 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 PLEKHH3Q7Z736 793 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 SMC5Q8IY18 1101 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 TGFBRAP1Q8WUH2 860 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 APBA2Q99767 749 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00272-201ENST00000367563 PI4KBQ9UBF8 816 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
LINC00272-201ENST00000367563 PALD1Q9ULE6 856 aa10.6□□□□□ -0.71
LINC00272-201ENST00000367563 DOCK3Q8IZD9 2030 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
LINC00272-201ENST00000367563 ASNSP08243 561 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 PDE6AP16499 860 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 PPP4CP60510 307 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
LINC00272-201ENST00000367563 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 ZYXQ15942 572 aaKnown RBP10.59□□□□□ -0.71
LINC00272-201ENST00000367563 SLC9C2Q5TAH2 1124 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 ANKRD45Q5TZF3 282 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 CCAR1Q8IX12 1150 aaKnown RBP10.59□□□□□ -0.71
LINC00272-201ENST00000367563 TRMT44Q8IYL2 757 aaKnown RBP10.59□□□□□ -0.71
LINC00272-201ENST00000367563 TRPV1Q8NER1 839 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 LBHD1Q9BQE6 289 aaPredicted RBP10.59□□□□□ -0.71
LINC00272-201ENST00000367563 ANTXR1Q9H6X2 564 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 ZBTB21Q9ULJ3 1066 aa10.59□□□□□ -0.71
LINC00272-201ENST00000367563 FLT1P17948 1338 aa10.58□□□□□ -0.71
LINC00272-201ENST00000367563 CNGA1P29973 690 aa10.58□□□□□ -0.72
LINC00272-201ENST00000367563 CYP2C19P33261 490 aa10.58□□□□□ -0.72
LINC00272-201ENST00000367563 SHHQ15465 462 aa10.58□□□□□ -0.72
LINC00272-201ENST00000367563 C9orf50Q5SZB4 431 aa10.58□□□□□ -0.72
LINC00272-201ENST00000367563 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
LINC00272-201ENST00000367563 METTL16Q86W50 562 aaKnown RBP10.58□□□□□ -0.72
LINC00272-201ENST00000367563 CRACR2BQ8N4Y2 399 aaPredicted RBP10.58□□□□□ -0.72
LINC00272-201ENST00000367563 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
LINC00272-201ENST00000367563 CDX2Q99626 313 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms