RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
PTPN7-202ENST00000367279 GOLGA1Q92805 767 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 AK7Q96M32 723 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 MRFAP1Q9Y605 127 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 LRP6O75581 1613 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 KLRK1P26718 216 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 IQUBQ8NA54 791 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 EEF2KMTQ96G04 330 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 PARD6BQ9BYG5 372 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 RBM28Q9NW13 759 aaKnown RBP13.97□□□□□ -0.17
PTPN7-202ENST00000367279 BAZ2AQ9UIF9 1905 aaKnown RBP13.97□□□□□ -0.17
PTPN7-202ENST00000367279 TRERF1Q96PN7 1200 aa13.96□□□□□ -0.17
PTPN7-202ENST00000367279 RIOK1Q9BRS2 568 aaKnown RBP13.96□□□□□ -0.17
PTPN7-202ENST00000367279 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
PTPN7-202ENST00000367279 FXR1P51114 621 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTPN7-202ENST00000367279 DPYDQ12882 1025 aa13.96□□□□□ -0.17
PTPN7-202ENST00000367279 CTAGE1Q96RT6 745 aa13.96□□□□□ -0.17
PTPN7-202ENST00000367279 TROAPQ12815 778 aa13.96□□□□□ -0.18
PTPN7-202ENST00000367279 TMTC3Q6ZXV5 915 aa13.96□□□□□ -0.18
PTPN7-202ENST00000367279 ELOA2Q8IYF1 753 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-202ENST00000367279 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.18
PTPN7-202ENST00000367279 GSDMAQ96QA5 445 aa13.96□□□□□ -0.18
PTPN7-202ENST00000367279 ADD3Q9UEY8 706 aaKnown RBP13.96□□□□□ -0.18
PTPN7-202ENST00000367279 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.18
PTPN7-202ENST00000367279 ADGRG1Q9Y653 693 aa13.96□□□□□ -0.18
PTPN7-202ENST00000367279 SLIT2O94813 1529 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 NUTM2BA6NNL0 878 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 NUTM2EB1AL46 878 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 PPP1R3GB7ZBB8 358 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 ADAMTS3O15072 1205 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 CALM1P0DP23 149 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 CALM2P0DP24 149 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 CALM3P0DP25 149 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 NELFBQ8WX92 580 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 SLF1Q9BQI6 1058 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 RHOXF2Q9BQY4 288 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 GDAQ9Y2T3 454 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 MFAP3LO75121 409 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 OAS2P29728 719 aaKnown RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 STAT6P42226 847 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 CHMP4BP1P59074 171 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 KRT31Q15323 416 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 PANX2Q96RD6 677 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 BMP15O95972 392 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 SCG2P13521 617 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 PRDX5P30044 214 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 TXLNAP40222 546 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 GYS2P54840 703 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 MECOMQ03112 1051 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 UBXN1Q04323 297 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 MCM6Q14566 821 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 PPP2R5BQ15173 497 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 CC2D1AQ6P1N0 951 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 SLC35F6Q8N357 371 aa13.95□□□□□ -0.18
PTPN7-202ENST00000367279 FAM84BQ96KN1 310 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 CRNKL1Q9BZJ0 848 aaKnown RBP13.95□□□□□ -0.18
PTPN7-202ENST00000367279 XDHP47989 1333 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.94□□□□□ -0.18
PTPN7-202ENST00000367279 PAK1Q13153 545 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 CCDC66A2RUB6 948 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 KCNQ2O43526 872 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 SASH3O75995 380 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 ABL1P00519 1130 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 GYPCP04921 128 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 FUT2Q10981 343 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 KAT14Q9H8E8 782 aa13.94□□□□□ -0.18
PTPN7-202ENST00000367279 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 ZRANB2O95218 330 aaKnown RBP eCLIP13.93□□□□□ -0.18
PTPN7-202ENST00000367279 KRT9P35527 623 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 PCMTD1Q96MG8 357 aaPredicted RBP13.93□□□□□ -0.18
PTPN7-202ENST00000367279 ANAPC4Q9UJX5 808 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 CNTNAP5Q8WYK1 1306 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 CTAGE9A4FU28 777 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 KCNJ18B7U540 433 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 USP17L8P0C7I0 530 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 USP5P45974 858 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 RCAN1P53805 252 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 KCNJ12Q14500 433 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 SMC1AQ14683 1233 aaKnown RBP13.93□□□□□ -0.18
PTPN7-202ENST00000367279 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
PTPN7-202ENST00000367279 NEK11Q8NG66 645 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 FAM53CQ9NYF3 392 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 GUCA1BQ9UMX6 200 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 NID2Q14112 1375 aa13.93□□□□□ -0.18
PTPN7-202ENST00000367279 CCDC194A0A1B0GVG4 234 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms