RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NAIPQ13075 1403 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 TCOF1Q13428 1488 aaKnown RBP4.15□□□□□ -1.74
SYNE1-207ENST00000367255 CXorf56Q9H5V9 222 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 UTP6Q9NYH9 597 aaKnown RBP4.15□□□□□ -1.74
SYNE1-207ENST00000367255 HDAC7Q8WUI4 952 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 BRIP1Q9BX63 1249 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 UBA2Q9UBT2 640 aaPredicted RBP4.15□□□□□ -1.74
SYNE1-207ENST00000367255 KDM1AO60341 852 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 SUN1O94901 812 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 SERPINB10P48595 397 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 ZSCAN26Q16670 478 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 SPDYAQ5MJ70 313 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 POTEAQ6S8J7 498 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 ZNF653Q96CK0 615 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 B4DLN1 442 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 MRPL12P52815 198 aaKnown RBP4.15□□□□□ -1.74
SYNE1-207ENST00000367255 KAZNQ674X7 775 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 ANKRD35Q8N283 1001 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 SCG3Q8WXD2 468 aaKnown RBP4.15□□□□□ -1.74
SYNE1-207ENST00000367255 M0R3G1 203 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 FKBP9P1Q75LS8 142 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 RASSF5Q8WWW0 418 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 ZNF518AQ6AHZ1 1483 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 E2F6O75461 281 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 CAPN1P07384 714 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 FERMT3Q86UX7 667 aa4.15□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC189A1A4V9 331 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 CCDC78A2IDD5 438 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 SPAG6O75602 509 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 LINC00299Q6ZSB3 139 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 MARCH10Q8NA82 808 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 IL1RAPL2Q9NP60 686 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ORC3Q9UBD5 711 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ATP10DQ9P241 1426 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 COG3Q96JB2 828 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ADGRA3Q8IWK6 1321 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 NUTM2BA6NNL0 878 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 NUTM2EB1AL46 878 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 CTIFO43310 598 aaKnown RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 CHMP4BP1P59074 171 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 SYDE1Q6ZW31 735 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 N4BP1O75113 896 aaKnown RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 GSDMAQ96QA5 445 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 RBSNQ9H1K0 784 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ZSCAN23Q3MJ62 389 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ZGPATQ8N5A5 531 aaKnown RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 GRK7Q8WTQ7 553 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 SPDL1Q96EA4 605 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 UBAP1Q9NZ09 502 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 PIGBOS1A0A0B4J2F0 54 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 TRIM60Q495X7 471 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 PNMA3Q9UL41 463 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 IGBP1P78318 339 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 CYP4A11Q02928 519 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 CYP4A22Q5TCH4 519 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 KLHL41O60662 606 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 KPNA2P52292 529 aaKnown RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 NKIRAS1Q9NYS0 192 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 MMP14P50281 582 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 IDH3BO43837 385 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 MAP3K7CLP57077 242 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 MTA1Q13330 715 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 NAA30Q147X3 362 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 RNF187Q5TA31 235 aaPredicted RBP4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ALCAMQ13740 583 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 ACAP3Q96P50 834 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 CLASP1Q7Z460 1538 aa4.15□□□□□ -1.75
SYNE1-207ENST00000367255 GOLGA8CPA6NN73 597 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MMEP08473 750 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 COPG1Q9Y678 874 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MAN1A2O60476 641 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 RIPK4P57078 832 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CDR2Q01850 454 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MAP3K10Q02779 954 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 AGRPO00253 132 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 EXOSC9Q06265 439 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 STX6O43752 255 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 AMPHP49418 695 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 PANX2Q96RD6 677 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 ALDH8A1Q9H2A2 487 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 RNF40O75150 1001 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 HGSO14964 777 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CEP19Q96LK0 163 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 NOP53Q9NZM5 478 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 KDM2BQ8NHM5 1336 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 H0Y3Z8 333 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 GOLGA8FQ08AF8 430 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 GOLGA8DPQ0D2H9 430 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 INAQ16352 499 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MINDY2Q8NBR6 621 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CARD9Q9H257 536 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 ADGRL2O95490 1459 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 KRT6AP02538 564 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 KRT6BP04259 564 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 ESRRGP62508 458 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 PPP4R4Q6NUP7 873 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 GGT6Q6P531 493 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 SCOCQ9UIL1 159 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 ARHGAP42A6NI28 874 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MAP3K13O43283 966 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms