RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 CTAGE15A4D2H0 777 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 CTAGE8P0CG41 777 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 ERCC5P28715 1186 aaPredicted RBP15.39■□□□□ 0.05
PRKN-205ENST00000366897 PBX1P40424 430 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 LIFRP42702 1097 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 SRLQ86TD4 932 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 CTAGE6Q86UF2 777 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 CTAGE4Q8IX94 777 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 LCORLQ8N3X6 602 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 ZCRB1Q8TBF4 217 aaKnown RBP15.39■□□□□ 0.05
PRKN-205ENST00000366897 ECM29Q5VYK3 1845 aa15.39■□□□□ 0.05
PRKN-205ENST00000366897 GSG1L2A8MUP6 293 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 MINDY4BA8MYZ0 360 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 PPP1R3GB7ZBB8 358 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 PES1O00541 588 aaKnown RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 SRGAP2O75044 1071 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 CSF1RP07333 972 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 RIN2Q8WYP3 895 aaPredicted RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 NAPGQ99747 312 aaPredicted RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 FOXP1Q9H334 677 aaPredicted RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 ARHGAP25P42331 645 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 KRT31Q15323 416 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 GSPT2Q8IYD1 628 aaKnown RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 TRIML1Q8N9V2 468 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 MSANTD4Q8NCY6 345 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 SPATA20Q8TB22 786 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 WASF1Q92558 559 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 SPEF2Q9C093 1822 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 RAB21Q9UL25 225 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 TRIM75PA6NK02 468 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 ERLIN1O75477 346 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 CDKAL1Q5VV42 579 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 ZNF654Q8IZM8 581 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 ZBTB38Q8NAP3 1195 aaPredicted RBP15.38■□□□□ 0.05
PRKN-205ENST00000366897 CAPZA3Q96KX2 299 aa15.38■□□□□ 0.05
PRKN-205ENST00000366897 STK36Q9NRP7 1315 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 MYH8P13535 1937 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 ANKRD18BA2A2Z9 1011 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 DEXIO95424 95 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 SLC20A2Q08357 652 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 RASGRF1Q13972 1273 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
PRKN-205ENST00000366897 FILIP1LQ4L180 1135 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 RRAGBQ5VZM2 374 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 FANCBQ8NB91 859 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 CWC15Q9P013 229 aaKnown RBP15.37■□□□□ 0.05
PRKN-205ENST00000366897 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 PDE8BO95263 885 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 KRT9P35527 623 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 CCDC125Q86Z20 511 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 VGLL2Q8N8G2 317 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 SDR42E1Q8WUS8 393 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 AKAP11Q9UKA4 1901 aa15.37■□□□□ 0.05
PRKN-205ENST00000366897 DDX60Q8IY21 1712 aaKnown RBP15.36■□□□□ 0.05
PRKN-205ENST00000366897 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
PRKN-205ENST00000366897 FAM204AQ9H8W3 233 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 ABHD10Q9NUJ1 306 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 KAT6BQ8WYB5 2073 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 CYP2D7A0A087X1C5 515 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 ERICH2A1L162 156 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 PLEKHA8P1O95397 391 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 USP5P45974 858 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 HSP90B2PQ58FF3 399 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 KANK3Q6NY19 840 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 GPIHBP1Q8IV16 184 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 SPATA5Q8NB90 893 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 HNRNPLLQ8WVV9 542 aaKnown RBP15.36■□□□□ 0.05
PRKN-205ENST00000366897 RABEP2Q9H5N1 569 aa15.36■□□□□ 0.05
PRKN-205ENST00000366897 V9GY48 417 aaPredicted RBP15.36■□□□□ 0.05
PRKN-205ENST00000366897 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
PRKN-205ENST00000366897 EIF3JO75822 258 aaKnown RBP15.35■□□□□ 0.05
PRKN-205ENST00000366897 CTSWP56202 376 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 CNGA4Q8IV77 575 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 ZNF579Q8NAF0 562 aaKnown RBP15.35■□□□□ 0.05
PRKN-205ENST00000366897 PSD3Q9NYI0 1048 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
PRKN-205ENST00000366897 ADAMTS3O15072 1205 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 DDB1Q16531 1140 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 NAA15Q9BXJ9 866 aaKnown RBP15.35■□□□□ 0.05
PRKN-205ENST00000366897 TSPYL1Q9H0U9 437 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 MYO6Q9UM54 1294 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 GDAQ9Y2T3 454 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 REXO2Q9Y3B8 237 aaKnown RBP15.35■□□□□ 0.05
PRKN-205ENST00000366897 MYH7P12883 1935 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 XDHP47989 1333 aa15.35■□□□□ 0.05
PRKN-205ENST00000366897 TRIM49BA6NDI0 452 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 MRPS25P82663 173 aaKnown RBP15.34■□□□□ 0.05
PRKN-205ENST00000366897 SART3Q15020 963 aaKnown RBP15.34■□□□□ 0.05
PRKN-205ENST00000366897 ELOA2Q8IYF1 753 aaPredicted RBP15.34■□□□□ 0.05
PRKN-205ENST00000366897 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 TTF2Q9UNY4 1162 aaKnown RBP15.34■□□□□ 0.05
PRKN-205ENST00000366897 CEP131Q9UPN4 1083 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 NLRP10Q86W26 655 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 MTRQ99707 1265 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms