RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 NOC2LQ9Y3T9 749 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 RBM8AQ9Y5S9 174 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-205ENST00000366769 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 RWDD2BP57060 319 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 ZNF449Q6P9G9 518 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 KIAA2013Q8IYS2 634 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 MAN1A1P33908 653 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 FAM210AQ96ND0 272 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 VPS16Q9H269 839 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 MAN1A2O60476 641 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 RAPGEF1Q13905 1077 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 NAPAP54920 295 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 GFAPP14136 432 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 WTAPQ15007 396 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 SCYL3Q8IZE3 742 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 CALCOCO2Q13137 446 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 IQSEC3Q9UPP2 1182 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 HELLSQ9NRZ9 838 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 GINS2Q9Y248 185 aa12.17□□□□□ -0.46
CDC42BPA-205ENST00000366769 DIAPH2O60879 1101 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 SIKE1Q9BRV8 207 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 KCNF1Q9H3M0 494 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 FANCLQ9NW38 375 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 FLOT1O75955 427 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 PARD3Q8TEW0 1356 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 RTN1Q16799 776 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 HSP90AA5PQ58FG0 334 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 PSMA7O14818 248 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 CHGBP05060 677 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 RPS6KA2Q15349 733 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 RBM26Q5T8P6 1007 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 STK10O94804 968 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 BIRC3Q13489 604 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 ADAT2Q7Z6V5 191 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 CYTH2Q99418 400 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 LCMT1Q9UIC8 334 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 MAPK8IP1Q9UQF2 711 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 BRD1O95696 1058 aa12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 NCOA5Q9HCD5 579 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-205ENST00000366769 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 NME8Q8N427 588 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 PTPDC1A2A3K4 754 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 PICALMQ13492 652 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 COQ7Q99807 217 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 MYH1P12882 1939 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 MYH4Q9Y623 1939 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 STX10O60499 249 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 ZNF202O95125 648 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 RAD23BP54727 409 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 ADCY1Q08828 1119 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 SPOPO43791 374 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 EEF1DP29692 281 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 MAP3K7CLP57077 242 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 ALG1Q9BT22 464 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 SCINQ9Y6U3 715 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 NCAPH2Q6IBW4 605 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 USP28Q96RU2 1077 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 CRNKL1Q9BZJ0 848 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 STXBP3O00186 592 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 TRPC3Q13507 836 aa12.15□□□□□ -0.46
CDC42BPA-205ENST00000366769 SFMBT1Q9UHJ3 866 aa12.15□□□□□ -0.47
CDC42BPA-205ENST00000366769 TNNI2P48788 182 aa12.15□□□□□ -0.47
CDC42BPA-205ENST00000366769 RNF217Q8TC41 542 aa12.15□□□□□ -0.47
CDC42BPA-205ENST00000366769 ABCD1P33897 745 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 CFAP70Q5T0N1 1121 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 CHMP2BQ9UQN3 213 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 SOWAHDA6NJG2 315 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 PLCB4Q15147 1175 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 TMTC1Q8IUR5 882 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 PDHBP11177 359 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 NLRP14Q86W24 1093 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 NGLY1Q96IV0 654 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 PDE4DIPQ5VU43 2346 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 SLC7A5Q01650 507 aa12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 TSTA3Q13630 321 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPA-205ENST00000366769 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms