RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 BCRP11274 1271 aa11.47□□□□□ -0.57
ZNF548-202ENST00000366197 ADALQ6DHV7 355 aa11.47□□□□□ -0.57
ZNF548-202ENST00000366197 FBXO11Q86XK2 927 aa11.47□□□□□ -0.57
ZNF548-202ENST00000366197 TMTC1Q8IUR5 882 aa11.47□□□□□ -0.57
ZNF548-202ENST00000366197 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
ZNF548-202ENST00000366197 PUS3Q9BZE2 481 aaKnown RBP11.47□□□□□ -0.57
ZNF548-202ENST00000366197 FAM204AQ9H8W3 233 aa11.47□□□□□ -0.57
ZNF548-202ENST00000366197 MYOM2P54296 1465 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 ATP2C2O75185 946 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 MXRA7P84157 204 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 CFAP58Q5T655 872 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 HACE1Q8IYU2 909 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 LRRC47Q8N1G4 583 aaKnown RBP11.46□□□□□ -0.57
ZNF548-202ENST00000366197 TAB2Q9NYJ8 693 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 GAS8O95995 478 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
ZNF548-202ENST00000366197 ERCC3P19447 782 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 DCUN1D2Q6PH85 259 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 CMTR1Q8N1G2 835 aaKnown RBP11.46□□□□□ -0.57
ZNF548-202ENST00000366197 KDM3AQ9Y4C1 1321 aa11.46□□□□□ -0.57
ZNF548-202ENST00000366197 CIAO1O76071 339 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 SCG2P13521 617 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 BLMP54132 1417 aaPredicted RBP11.46□□□□□ -0.58
ZNF548-202ENST00000366197 ZNF365Q70YC5 407 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 ANKRD35Q8N283 1001 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 GPR161Q8N6U8 529 aaKnown RBP11.46□□□□□ -0.58
ZNF548-202ENST00000366197 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.58
ZNF548-202ENST00000366197 CBX8Q9HC52 389 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.58
ZNF548-202ENST00000366197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.46□□□□□ -0.58
ZNF548-202ENST00000366197 SSH2Q76I76 1423 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 SMIM23A6NLE4 172 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 FLOT1O75955 427 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 KRT19P08727 400 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 POLR2MP0CAP2 368 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 RBSNQ9H1K0 784 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 CTTNBP2NLQ9P2B4 639 aa11.46□□□□□ -0.58
ZNF548-202ENST00000366197 BRD1O95696 1058 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 TNNI1P19237 187 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 PRR16Q569H4 304 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 ARHGEF16Q5VV41 709 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 GALNT17Q6IS24 598 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 DEPTORQ8TB45 409 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
ZNF548-202ENST00000366197 DAPK3O43293 454 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
ZNF548-202ENST00000366197 PFKFB2O60825 505 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 MCF2L2Q86YR7 1114 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 NELFBQ8WX92 580 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 SELENOSQ9BQE4 189 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 LARSQ9P2J5 1176 aaKnown RBP11.45□□□□□ -0.58
ZNF548-202ENST00000366197 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
ZNF548-202ENST00000366197 GOLGA8HP0CJ92 632 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 UBL4BQ8N7F7 174 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 RDH13Q8NBN7 331 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 E7EVH7 732 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 TRERF1Q96PN7 1200 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 SMC6Q96SB8 1091 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 NAPGQ99747 312 aaPredicted RBP11.45□□□□□ -0.58
ZNF548-202ENST00000366197 BLZF1Q9H2G9 400 aa11.45□□□□□ -0.58
ZNF548-202ENST00000366197 ARHGAP6O43182 974 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 CCDC6Q16204 474 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 NUCKS1Q9H1E3 243 aaKnown RBP11.44□□□□□ -0.58
ZNF548-202ENST00000366197 PCDHA1Q9Y5I3 950 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 FRMPD2Q68DX3 1309 aaPredicted RBP11.44□□□□□ -0.58
ZNF548-202ENST00000366197 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 ANKS4BQ8N8V4 417 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 FOSP01100 380 aaPredicted RBP11.44□□□□□ -0.58
ZNF548-202ENST00000366197 ADORA1P30542 326 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 KCNK9Q9NPC2 374 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
ZNF548-202ENST00000366197 DDAH1O94760 285 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 TECP42680 631 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 PPP2R3AQ06190 1150 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 RASA3Q14644 834 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 FAM47CQ5HY64 1035 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
ZNF548-202ENST00000366197 NACA2Q9H009 215 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 IMPACTQ9P2X3 320 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 STAP2Q9UGK3 403 aa11.44□□□□□ -0.58
ZNF548-202ENST00000366197 USP6P35125 1406 aa11.43□□□□□ -0.58
ZNF548-202ENST00000366197 ZMYM6O95789 1325 aa11.43□□□□□ -0.58
ZNF548-202ENST00000366197 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
ZNF548-202ENST00000366197 OR52Z1P0C646 297 aa11.43□□□□□ -0.58
ZNF548-202ENST00000366197 TUBB2AQ13885 445 aa11.43□□□□□ -0.58
ZNF548-202ENST00000366197 CPLX4Q7Z7G2 160 aa11.43□□□□□ -0.58
ZNF548-202ENST00000366197 GPBP1Q86WP2 473 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms