RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ERICH2A1L162 156 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 SCRN1Q12765 414 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 SPP2Q13103 211 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 ANKRD13AQ8IZ07 590 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
SNX6-201ENST00000362031 CPVLQ9H3G5 476 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 TRIM75PA6NK02 468 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
SNX6-201ENST00000362031 ADD1P35611 737 aaKnown RBP12.61□□□□□ -0.39
SNX6-201ENST00000362031 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
SNX6-201ENST00000362031 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
SNX6-201ENST00000362031 IRF6O14896 467 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 NT5C2P49902 561 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 MTMR2Q13614 643 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
SNX6-201ENST00000362031 F5H6K3 240 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 K7ELQ4 463 aaPredicted RBP12.59□□□□□ -0.39
SNX6-201ENST00000362031 ZBTB43O43298 467 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 RAD21O60216 631 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 CTDNEP1O95476 244 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 NDUFB10O96000 172 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 KLRC3Q07444 240 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
SNX6-201ENST00000362031 ANKRD1Q15327 319 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 SAPCD2Q86UD0 394 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 ZNF274Q96GC6 653 aaPredicted RBP12.59□□□□□ -0.39
SNX6-201ENST00000362031 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 CSADQ9Y600 493 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 PFKFB2O60825 505 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 PDHBP11177 359 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 HUNKP57058 714 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 TTBK2Q6IQ55 1244 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 FANCBQ8NB91 859 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 ZNF280CQ8ND82 737 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 WDR18Q9BV38 432 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
SNX6-201ENST00000362031 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.39
SNX6-201ENST00000362031 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 SNHG28P0DPA3 235 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 HMGCS2P54868 508 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 FKBP1BP68106 108 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 KCTD1Q719H9 257 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 GTF3C6Q969F1 213 aa12.58□□□□□ -0.4
SNX6-201ENST00000362031 JAK2O60674 1132 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 METAP2P50579 478 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX6-201ENST00000362031 BACE1P56817 501 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 NTRK3Q16288 839 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 SLFN13Q68D06 897 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
SNX6-201ENST00000362031 ARHGEF10LQ9HCE6 1279 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 PALM3A6NDB9 673 aaPredicted RBP12.57□□□□□ -0.4
SNX6-201ENST00000362031 GOLGA8AA7E2F4 631 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 ANP32AP39687 249 aaKnown RBP12.57□□□□□ -0.4
SNX6-201ENST00000362031 HTRA3P83110 453 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 FUT2Q10981 343 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 MOGSQ13724 837 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 GRM4Q14833 912 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 HSCBQ8IWL3 235 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
SNX6-201ENST00000362031 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 FEZ1Q99689 392 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 KIAA1683Q9H0B3 1180 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 PTPRFP10586 1907 aa12.57□□□□□ -0.4
SNX6-201ENST00000362031 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 CYTH3O43739 400 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 DDAH1O94760 285 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 SLC16A2P36021 539 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 MCM2P49736 904 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms