RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 HINFPQ9BQA5 517 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 RHOXF2BP0C7M4 288 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 LPIN2Q92539 896 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 RHOXF2Q9BQY4 288 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 VPS16Q9H269 839 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 CTNND2Q9UQB3 1225 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 MTMR7Q9Y216 660 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 NID2Q14112 1375 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
SMC3-201ENST00000361804 GYG1P46976 350 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 MPHOSPH8Q99549 860 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 VGLL3A8MV65 326 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 PDE8AO60658 829 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 CYP2C19P33261 490 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 MCM6Q14566 821 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 ZNF569Q5MCW4 686 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 ENOX1Q8TC92 643 aaKnown RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 PNKPQ96T60 521 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 PLIN2Q99541 437 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 EXOC5O00471 708 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 STX10O60499 249 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 CYP7A1P22680 504 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 PKN1Q16512 942 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 UBAC1Q9BSL1 405 aa12.04□□□□□ -0.48
SMC3-201ENST00000361804 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 AKR1B15C9JRZ8 316 aaPredicted RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
SMC3-201ENST00000361804 SYNRGQ9UMZ2 1314 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 PLCD1P51178 756 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 PPARAQ07869 468 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 RILPL1Q5EBL4 403 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
SMC3-201ENST00000361804 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 ERICH2A1L162 156 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 DEXIO95424 95 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 RSRC2Q7L4I2 434 aaKnown RBP12.03□□□□□ -0.48
SMC3-201ENST00000361804 ENAHQ8N8S7 591 aaPredicted RBP12.03□□□□□ -0.48
SMC3-201ENST00000361804 MLKLQ8NB16 471 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 TAB2Q9NYJ8 693 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 GYPCP04921 128 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 FAM47AQ5JRC9 791 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 SLC35F6Q8N357 371 aa12.03□□□□□ -0.48
SMC3-201ENST00000361804 CCP110O43303 1012 aa12.02□□□□□ -0.48
SMC3-201ENST00000361804 PHACTR2O75167 634 aa12.02□□□□□ -0.48
SMC3-201ENST00000361804 SLC5A1P13866 664 aa12.02□□□□□ -0.48
SMC3-201ENST00000361804 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.48
SMC3-201ENST00000361804 MTRQ99707 1265 aa12.02□□□□□ -0.48
SMC3-201ENST00000361804 FUT8Q9BYC5 575 aa12.02□□□□□ -0.48
SMC3-201ENST00000361804 FOXP1Q9H334 677 aaPredicted RBP12.02□□□□□ -0.48
SMC3-201ENST00000361804 NT5DC1Q5TFE4 455 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 RASGRP4Q8TDF6 673 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 NAV1Q8NEY1 1877 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 UQCRFS1P1P0C7P4 283 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 ERVK-24P63145 666 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 CUL4BQ13620 913 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 STAG1Q8WVM7 1258 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 KRT23Q9C075 422 aa12.02□□□□□ -0.49
SMC3-201ENST00000361804 QSER1Q2KHR3 1735 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 CCDC175P0C221 793 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 MCM7P33993 719 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 ERFEQ4G0M1 354 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 TXNRD3Q86VQ6 643 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 PPFIBP1Q86W92 1011 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 GDAP1L1Q96MZ0 367 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 ANKZF1Q9H8Y5 726 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 ADD3Q9UEY8 706 aaKnown RBP12.01□□□□□ -0.49
SMC3-201ENST00000361804 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 MYH8P13535 1937 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 STK36Q9NRP7 1315 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 PES1O00541 588 aaKnown RBP12.01□□□□□ -0.49
SMC3-201ENST00000361804 ENC1O14682 589 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 CAPN2P17655 700 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 CHMP4BP1P59074 171 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 PTGDRQ13258 359 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 SART3Q15020 963 aaKnown RBP12.01□□□□□ -0.49
SMC3-201ENST00000361804 IL17AQ16552 155 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 NCAPH2Q6IBW4 605 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 CHP1Q99653 195 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 ARFGAP3Q9NP61 516 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 XDHP47989 1333 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 PIK3AP1Q6ZUJ8 805 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms