RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CHP1Q99653 195 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 PPANQ9NQ55 473 aaKnown RBP14.27□□□□□ -0.13
VAMP1-201ENST00000361716 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 CXCR5P32302 372 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 PPFIA1Q13136 1202 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.27□□□□□ -0.13
VAMP1-201ENST00000361716 BLZF1Q9H2G9 400 aa14.27□□□□□ -0.13
VAMP1-201ENST00000361716 CDKL5O76039 1030 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 ELF1P32519 619 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 GUCY1A3Q02108 690 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 TBX2Q13207 712 aaPredicted RBP14.26□□□□□ -0.13
VAMP1-201ENST00000361716 CCDC181Q5TID7 509 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
VAMP1-201ENST00000361716 CTNND2Q9UQB3 1225 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 NEDD4P46934 1319 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 IDEP14735 1019 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 SEC24CP53992 1094 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 USP14P54578 494 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
VAMP1-201ENST00000361716 JAKMIP2Q96AA8 810 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 SMARCAL1Q9NZC9 954 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
VAMP1-201ENST00000361716 ANGEL1Q9UNK9 670 aaKnown RBP14.26□□□□□ -0.13
VAMP1-201ENST00000361716 HSF2BPO75031 334 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 MFAP3LO75121 409 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 PRDM1O75626 825 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 EZH2Q15910 746 aaKnown RBP14.25□□□□□ -0.13
VAMP1-201ENST00000361716 KCTD19Q17RG1 926 aaPredicted RBP14.25□□□□□ -0.13
VAMP1-201ENST00000361716 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 SYNRGQ9UMZ2 1314 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 EIF4E1BA6NMX2 242 aaKnown RBP14.25□□□□□ -0.13
VAMP1-201ENST00000361716 ARL8AQ96BM9 186 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.25□□□□□ -0.13
VAMP1-201ENST00000361716 ANKARQ7Z5J8 1434 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
VAMP1-201ENST00000361716 APBA1Q02410 837 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 UBXN1Q04323 297 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
VAMP1-201ENST00000361716 MLKLQ8NB16 471 aa14.25□□□□□ -0.13
VAMP1-201ENST00000361716 E7EVH7 732 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 MCM3P25205 808 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 RFX5P48382 616 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-201ENST00000361716 SATB1Q01826 763 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 MAATS1Q7Z4T9 603 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 PANX2Q96RD6 677 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 ARMT1Q9H993 441 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 EIF3HO15372 352 aaKnown RBP eCLIP14.24□□□□□ -0.13
VAMP1-201ENST00000361716 KIF1CO43896 1103 aaKnown RBP14.24□□□□□ -0.13
VAMP1-201ENST00000361716 PRPF6O94906 941 aaKnown RBP14.24□□□□□ -0.13
VAMP1-201ENST00000361716 KRT14P02533 472 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 GUCY2FP51841 1108 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 ZNF174Q15697 407 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 ODF2Q5BJF6 829 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 B4GALNT4Q76KP1 1039 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 IQCA1Q86XH1 822 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 CPP00450 1065 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 PDHBP11177 359 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 EVA1CP58658 441 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 NR1I3Q14994 352 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
VAMP1-201ENST00000361716 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 ERVK-24P63145 666 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 CYP27A1Q02318 531 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 RRAGBQ5VZM2 374 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 CYP26C1Q6V0L0 522 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 ATG9AQ7Z3C6 839 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 HDAC7Q8WUI4 952 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 RANBP6O60518 1105 aaKnown RBP14.23□□□□□ -0.13
VAMP1-201ENST00000361716 SARNPP82979 210 aaKnown RBP14.23□□□□□ -0.13
VAMP1-201ENST00000361716 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 PLBD2Q8NHP8 589 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 UBAC1Q9BSL1 405 aa14.23□□□□□ -0.13
VAMP1-201ENST00000361716 EPN1Q9Y6I3 576 aaPredicted RBP14.23□□□□□ -0.13
VAMP1-201ENST00000361716 GYPCP04921 128 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 PHKG2P15735 406 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 ANTXR2P58335 489 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 CCDC121Q6ZUS5 278 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 TBC1D10CQ8IV04 446 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 MAGEB6Q8N7X4 407 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 ENOX1Q8TC92 643 aaKnown RBP14.22□□□□□ -0.13
VAMP1-201ENST00000361716 APPBP2Q92624 585 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
VAMP1-201ENST00000361716 KLC4Q9NSK0 619 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 VPS54Q9P1Q0 977 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 PCDHB6Q9Y5E3 794 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 ZNF532Q9HCE3 1301 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 FAM170AA1A519 330 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 CHUKO15111 745 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 OPA1O60313 960 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 TUBBP07437 444 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 EZRP15311 586 aaKnown RBP14.22□□□□□ -0.13
VAMP1-201ENST00000361716 GCKP35557 465 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 CCDC40Q4G0X9 1142 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms