RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
NSMCE1-201ENST00000361439 TNKSO95271 1327 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 AOC2O75106 756 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 MAP2K1Q02750 393 aaPredicted RBP16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 MOGSQ13724 837 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 FBXL16Q8N461 479 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 BRI3BPQ8WY22 251 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 AGTPBP1Q9UPW5 1226 aa16.25■□□□□ 0.19
NSMCE1-201ENST00000361439 NMT2O60551 498 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 HOXA7P31268 230 aaPredicted RBP16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 LIFRP42702 1097 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 EXOSC10Q01780 885 aaKnown RBP16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 ATP2B2Q01814 1243 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 ADCK5Q3MIX3 580 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 IFNL1Q8IU54 200 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 ENAHQ8N8S7 591 aaPredicted RBP16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 IGDCC4Q8TDY8 1250 aa16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
NSMCE1-201ENST00000361439 F5H6K3 240 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 WDR46O15213 610 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 CA12O43570 354 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 PRC1O43663 620 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 ANTXR2P58335 489 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 KLRC3Q07444 240 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 SEC23AQ15436 765 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 GPAT2Q6NUI2 795 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 ZIC5Q96T25 663 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 PTPN18Q99952 460 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 TMEM47Q9BQJ4 181 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 CFHR5Q9BXR6 569 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 C22orf23Q9BZE7 217 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 SAGE1Q9NXZ1 904 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 CEP350Q5VT06 3117 aa16.23■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 BTBD19C9JJ37 291 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 VCAM1P19320 739 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 WTAPQ15007 396 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 GADL1Q6ZQY3 521 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 RUFY3Q7L099 469 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 CYP46A1Q9Y6A2 500 aa16.22■□□□□ 0.19
NSMCE1-201ENST00000361439 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 RPS6KB1P23443 525 aa16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 SGMS1Q86VZ5 419 aa16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 PTPRFP10586 1907 aa16.21■□□□□ 0.19
NSMCE1-201ENST00000361439 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.18
NSMCE1-201ENST00000361439 MYPNQ86TC9 1320 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 PDHXO00330 501 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 IGF2BP3O00425 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 SH2B2O14492 632 aaPredicted RBP16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 PLA2G6O60733 806 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 NDUFB10O96000 172 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 OSBPP22059 807 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 SLFN13Q68D06 897 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 LRRC47Q8N1G4 583 aaKnown RBP16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 PARK7Q99497 189 aaKnown RBP16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 MAP3K14Q99558 947 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 ALDH8A1Q9H2A2 487 aaPredicted RBP16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 LY9Q9HBG7 655 aa16.2■□□□□ 0.18
NSMCE1-201ENST00000361439 SLC1A4P43007 532 aa16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 RCAN1P53805 252 aa16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 CATIPQ7Z7H3 387 aa16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 WBP1LQ9NX94 342 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms