RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 SGMS1Q86VZ5 419 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 BEGAINQ9BUH8 593 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 ELP3Q9H9T3 547 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 SENP2Q9HC62 589 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 SYNPO2Q9UMS6 1093 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 STX8Q9UNK0 236 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 ZHX2Q9Y6X8 837 aa14.56□□□□□ -0.08
NIF3L1-201ENST00000359683 A0A1W2PRG0 241 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 TOP1P11387 765 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 EVCP57679 992 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 TOB2Q14106 344 aaPredicted RBP14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 IFIT1BQ5T764 474 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 ACER1Q8TDN7 264 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 AS3MTQ9HBK9 375 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 TMX2Q9Y320 296 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 AFG3L2Q9Y4W6 797 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 AK2P54819 239 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 FGD1P98174 961 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 ZNF280CQ8ND82 737 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 BRF1Q92994 677 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 ARHGEF10LQ9HCE6 1279 aa14.55□□□□□ -0.08
NIF3L1-201ENST00000359683 PHIPQ8WWQ0 1821 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 ATP2B2Q01814 1243 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 SPP2Q13103 211 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 PPIL2Q13356 520 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 ANKRD1Q15327 319 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 OPTNQ96CV9 577 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 HHIPL1Q96JK4 782 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 KIAA1683Q9H0B3 1180 aa14.54□□□□□ -0.08
NIF3L1-201ENST00000359683 CASP8AP2Q9UKL3 1982 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 USP17L10C9JJH3 530 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 CXCL11O14625 94 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 ST18O60284 1047 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 GJA5P36382 358 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 BACE1P56817 501 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 PNMA1Q8ND90 353 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 SH2D4AQ9H788 454 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 TSKSQ9UJT2 592 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 BRPF3Q9ULD4 1205 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 KCNH4Q9UQ05 1017 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
NIF3L1-201ENST00000359683 CCDC69A6NI79 296 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 C19orf81C9J6K1 198 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 IRF6O14896 467 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 MAP2K2P36507 400 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 APOBRQ0VD83 1088 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 SH3D19Q5HYK7 790 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 RGMBQ6NW40 437 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 NFXL1Q6ZNB6 911 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 LRRC47Q8N1G4 583 aaKnown RBP14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 GMCL1P1Q8NEA9 526 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 OTUD5Q96G74 571 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 WNK4Q96J92 1243 aa14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.08
NIF3L1-201ENST00000359683 F5H6K3 240 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 ZNF157P51786 506 aaPredicted RBP14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 KLRC3Q07444 240 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 TROAPQ12815 778 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 SPRYD7Q5W111 196 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 APOA5Q6Q788 366 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 CATIPQ7Z7H3 387 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 ZNF654Q8IZM8 581 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 ZNF274Q96GC6 653 aaPredicted RBP14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 LARP6Q9BRS8 491 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 VCPKMTQ9H867 229 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 TPCN1Q9ULQ1 816 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 SLC12A7Q9Y666 1083 aa14.52□□□□□ -0.09
NIF3L1-201ENST00000359683 KLF18A0A0U1RQI7 1052 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 TRIM75PA6NK02 468 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 ZBTB48P10074 688 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 MCM2P49736 904 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 RCAN1P53805 252 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 USP14P54578 494 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 MTMR2Q13614 643 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 KIAA1755Q5JYT7 1200 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 USP17L2Q6R6M4 530 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 SYNE3Q6ZMZ3 975 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 SNX21Q969T3 373 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 MAP3K14Q99558 947 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 FEZ1Q99689 392 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 GOPCQ9HD26 462 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 TSHZ2Q9NRE2 1034 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 EMILIN3Q9NT22 766 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 LIMCH1Q9UPQ0 1083 aa14.51□□□□□ -0.09
NIF3L1-201ENST00000359683 A0A0G2JLL6 359 aaPredicted RBP14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 DDAH1O94760 285 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 NDUFB10O96000 172 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 PDIA3P30101 505 aaKnown RBP14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 SLFN13Q68D06 897 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 PRRT2Q7Z6L0 340 aaPredicted RBP14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 RASAL3Q86YV0 1011 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 LPAR1Q92633 364 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 CCDC102AQ96A19 550 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 C12orf42Q96LP6 360 aa14.5□□□□□ -0.09
NIF3L1-201ENST00000359683 HPS5Q9UPZ3 1129 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms