RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RABEP1Q15276 862 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 Q6ZUG5 572 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 LY9Q9HBG7 655 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 PDRG1Q9NUG6 133 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 TMX2Q9Y320 296 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 HMGCS2P54868 508 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 SNAPC2Q13487 334 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 CYP4F22Q6NT55 531 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 MKL1Q969V6 931 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 KIAA1683Q9H0B3 1180 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 GPHNQ9NQX3 736 aaPredicted RBP17.87■□□□□ 0.45
TPM1-206ENST00000358278 KCNH4Q9UQ05 1017 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 MTMR7Q9Y216 660 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 PARP14Q460N5 1801 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 MYH6P13533 1939 aa17.87■□□□□ 0.45
TPM1-206ENST00000358278 CCDC69A6NI79 296 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 C19orf81C9J6K1 198 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 CXCL11O14625 94 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 LIFRP42702 1097 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 GTF2A2P52657 109 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 TMTC2Q8N394 836 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 PNMA1Q8ND90 353 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 ANKS1AQ92625 1134 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 SYNPO2Q9UMS6 1093 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 USP17L2Q6R6M4 530 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 BRF1Q92994 677 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 CAPNS2Q96L46 248 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 VCPKMTQ9H867 229 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 SENP2Q9HC62 589 aa17.86■□□□□ 0.45
TPM1-206ENST00000358278 A0A0G2JLL6 359 aaPredicted RBP17.85■□□□□ 0.45
TPM1-206ENST00000358278 FAM155AB1AL88 458 aaPredicted RBP17.85■□□□□ 0.45
TPM1-206ENST00000358278 DGKZQ13574 1117 aa17.85■□□□□ 0.45
TPM1-206ENST00000358278 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
TPM1-206ENST00000358278 PRRT2Q7Z6L0 340 aaPredicted RBP17.85■□□□□ 0.45
TPM1-206ENST00000358278 SPICE1Q8N0Z3 855 aa17.85■□□□□ 0.45
TPM1-206ENST00000358278 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
TPM1-206ENST00000358278 GMCL1P1Q8NEA9 526 aa17.85■□□□□ 0.45
TPM1-206ENST00000358278 F5H6K3 240 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 CETPP11597 493 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 KLRC3Q07444 240 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 CATIPQ7Z7H3 387 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 SGMS1Q86VZ5 419 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 FBXL16Q8N461 479 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 LPAR1Q92633 364 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 CHMP4CQ96CF2 233 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 ISY1Q9ULR0 285 aaKnown RBP17.84■□□□□ 0.45
TPM1-206ENST00000358278 NAP1L2Q9ULW6 460 aaPredicted RBP17.84■□□□□ 0.45
TPM1-206ENST00000358278 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 BAZ2BQ9UIF8 2168 aaKnown RBP17.84■□□□□ 0.45
TPM1-206ENST00000358278 ST18O60284 1047 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 NOGQ13253 232 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 ANKRD1Q15327 319 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 ZNF654Q8IZM8 581 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 AGXT2Q9BYV1 514 aa17.84■□□□□ 0.45
TPM1-206ENST00000358278 CCL15-CCL14A0A0B4J2E2 113 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 NDUFB10O96000 172 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 AK2P54819 239 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 TOB2Q14106 344 aaPredicted RBP17.83■□□□□ 0.44
TPM1-206ENST00000358278 CCL15Q16663 113 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 SLFN13Q68D06 897 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 FASTKD5Q7L8L6 764 aaKnown RBP17.83■□□□□ 0.44
TPM1-206ENST00000358278 PROCA1Q8NCQ7 364 aaPredicted RBP17.83■□□□□ 0.44
TPM1-206ENST00000358278 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 EMILIN3Q9NT22 766 aa17.83■□□□□ 0.44
TPM1-206ENST00000358278 THSD7BQ9C0I4 1608 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 KLF18A0A0U1RQI7 1052 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 MANSC4A6NHS7 340 aaPredicted RBP17.82■□□□□ 0.44
TPM1-206ENST00000358278 VCAM1P19320 739 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 CCDC96Q2M329 555 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 NOL8Q76FK4 1167 aaKnown RBP17.82■□□□□ 0.44
TPM1-206ENST00000358278 NUP133Q8WUM0 1156 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 C12orf42Q96LP6 360 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 MYL10Q9BUA6 226 aa17.82■□□□□ 0.44
TPM1-206ENST00000358278 COL11A1P12107 1806 aaPredicted RBP17.82■□□□□ 0.44
TPM1-206ENST00000358278 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
TPM1-206ENST00000358278 WDR46O15213 610 aaKnown RBP17.81■□□□□ 0.44
TPM1-206ENST00000358278 DDAH1O94760 285 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 SLC1A4P43007 532 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 SREBF2Q12772 1141 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 KIAA1755Q5JYT7 1200 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 APOA5Q6Q788 366 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 RASGRP2Q7LDG7 609 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 MICU3Q86XE3 530 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 IL27Q8NEV9 243 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
TPM1-206ENST00000358278 ALDH8A1Q9H2A2 487 aaPredicted RBP17.81■□□□□ 0.44
TPM1-206ENST00000358278 RLFQ13129 1914 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 GOLGA8BA8MQT2 603 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 AOC2O75106 756 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 PDHBP11177 359 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 DCAF4Q8WV16 495 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 BRI3BPQ8WY22 251 aa17.81■□□□□ 0.44
TPM1-206ENST00000358278 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms