RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 MLKLQ8NB16 471 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
RNF40-202ENST00000357890 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.617e-8■■□□□ 13.5
RNF40-202ENST00000357890 YY1AP1Q9H869 796 aa11.23□□□□□ -0.61
RNF40-202ENST00000357890 SH2B2O14492 632 aaPredicted RBP11.22□□□□□ -0.61
RNF40-202ENST00000357890 HSF2BPO75031 334 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 GNAT2P19087 354 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
RNF40-202ENST00000357890 SLC4A8Q2Y0W8 1093 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 PIGBQ92521 554 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 TFRCP02786 760 aaKnown RBP11.22□□□□□ -0.61
RNF40-202ENST00000357890 CSF1RP07333 972 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 CDC27P30260 824 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 NR5A1Q13285 461 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 CYB5R4Q7L1T6 521 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 TBC1D10CQ8IV04 446 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 PIH1D3Q9NQM4 214 aaKnown RBP11.22□□□□□ -0.61
RNF40-202ENST00000357890 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
RNF40-202ENST00000357890 MROH5Q6ZUA9 1318 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 PPP6R2O75170 966 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 ACTN3Q08043 901 aaPredicted RBP11.22□□□□□ -0.61
RNF40-202ENST00000357890 HLFQ16534 295 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNF40-202ENST00000357890 CAPS2Q9BXY5 557 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 VPS16Q9H269 839 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 MAPK8IP1Q9UQF2 711 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 RIPOR2Q9Y4F9 1068 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 MRFAP1Q9Y605 127 aa11.22□□□□□ -0.61
RNF40-202ENST00000357890 MACROD2A1Z1Q3 448 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 ANTXR2P58335 489 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 HLTFQ14527 1009 aaKnown RBP eCLIP11.21□□□□□ -0.61
RNF40-202ENST00000357890 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 IFNL3Q8IZI9 196 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 MED4Q9NPJ6 270 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 SAMSN1Q9NSI8 373 aaKnown RBP11.21□□□□□ -0.61
RNF40-202ENST00000357890 BTG4Q9NY30 223 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 MRC1P22897 1456 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 VWA3AA6NCI4 1184 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 SNAP23O00161 211 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 PRDM1O75626 825 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 CYP7A1P22680 504 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 CCDC152Q4G0S7 254 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 IQCEQ6IPM2 695 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 CCDC121Q6ZUS5 278 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 CATIPQ7Z7H3 387 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
RNF40-202ENST00000357890 STRCQ7RTU9 1775 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 CORO7P57737 925 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 ZNF174Q15697 407 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 CEP85LQ5SZL2 805 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 CCDC122Q5T0U0 273 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 BPIFA3Q9BQP9 254 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 MROH7-TTC4A0A0A0MT08 1334 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 CDHR2Q9BYE9 1310 aa11.21□□□□□ -0.62
RNF40-202ENST00000357890 NLRP5P59047 1200 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 ENOX2Q16206 610 aaKnown RBP11.2□□□□□ -0.62
RNF40-202ENST00000357890 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
RNF40-202ENST00000357890 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 MAGEC2Q9UBF1 373 aaPredicted RBP11.2□□□□□ -0.62
RNF40-202ENST00000357890 UBE2Q2LH0YL09 131 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 STX10O60499 249 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 LRRC31Q6UY01 552 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 TAX1BP1Q86VP1 789 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 ESR2Q92731 530 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 ZBTB1Q9Y2K1 713 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 DEXIO95424 95 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 GCKP35557 465 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 SMYD4Q8IYR2 804 aaPredicted RBP11.2□□□□□ -0.62
RNF40-202ENST00000357890 CABS1Q96KC9 395 aa11.2□□□□□ -0.62
RNF40-202ENST00000357890 STRBPQ96SI9 672 aaKnown RBP11.2□□□□□ -0.62
RNF40-202ENST00000357890 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
RNF40-202ENST00000357890 ADAMTS2O95450 1211 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 IFIT1BQ5T764 474 aaKnown RBP11.19□□□□□ -0.62
RNF40-202ENST00000357890 REXO1L1PQ8IX06 675 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 PNKPQ96T60 521 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 CRYBG1Q9Y4K1 1723 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
RNF40-202ENST00000357890 A0A1B0GUA9 196 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 PRKAB2O43741 272 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
RNF40-202ENST00000357890 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms