RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 DUOX1Q9NRD9 1551 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 A0A087X0B3 334 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 EIF3JO75822 258 aaKnown RBP20.05■□□□□ 0.8
RTN4-204ENST00000357732 DDAH1O94760 285 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 ATP2C1P98194 919 aaPredicted RBP20.05■□□□□ 0.8
RTN4-204ENST00000357732 SEMA3FQ13275 785 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 HDXQ7Z353 690 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 LZTFL1Q9NQ48 299 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 RMND1Q9NWS8 449 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 GYPCP04921 128 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 CYP26C1Q6V0L0 522 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 TNFRSF25Q93038 417 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 EPSTI1Q96J88 318 aa20.05■□□□□ 0.8
RTN4-204ENST00000357732 ZSCAN10Q96SZ4 725 aaPredicted RBP20.05■□□□□ 0.8
RTN4-204ENST00000357732 LAMB2P55268 1798 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 AFMP43652 599 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 HNRNPH2P55795 449 aaKnown RBP20.04■□□□□ 0.8
RTN4-204ENST00000357732 SUSD4Q5VX71 490 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 CCDC82Q8N4S0 544 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 EPC1Q9H2F5 836 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 LRP2BPQ9P2M1 347 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 MYH2Q9UKX2 1941 aa20.04■□□□□ 0.8
RTN4-204ENST00000357732 FGRP09769 529 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 CASP14P31944 242 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 SLC20A2Q08357 652 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 NAPGQ99747 312 aaPredicted RBP20.03■□□□□ 0.8
RTN4-204ENST00000357732 ANKZF1Q9H8Y5 726 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 ATP2B1P20020 1258 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 KIF4BQ2VIQ3 1234 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 CCDC152Q4G0S7 254 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 ZNF569Q5MCW4 686 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 TTC38Q5R3I4 469 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 BEND6Q5SZJ8 279 aaPredicted RBP20.03■□□□□ 0.8
RTN4-204ENST00000357732 KLHL10Q6JEL2 608 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 IQCA1Q86XH1 822 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 BRIP1Q9BX63 1249 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 VPS54Q9P1Q0 977 aa20.03■□□□□ 0.8
RTN4-204ENST00000357732 IGHMBP2P38935 993 aaKnown RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 E2F4Q16254 413 aa20.02■□□□□ 0.8
RTN4-204ENST00000357732 CMTR1Q8N1G2 835 aaKnown RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 ENAHQ8N8S7 591 aaPredicted RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.8
RTN4-204ENST00000357732 RREB1Q92766 1687 aa20.02■□□□□ 0.8
RTN4-204ENST00000357732 GTPBP6O43824 516 aaPredicted RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 BCAMP50895 628 aa20.02■□□□□ 0.8
RTN4-204ENST00000357732 PARP10Q53GL7 1025 aa20.02■□□□□ 0.8
RTN4-204ENST00000357732 IFIT1BQ5T764 474 aaKnown RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 IRX2Q9BZI1 471 aaPredicted RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 CWC15Q9P013 229 aaKnown RBP20.02■□□□□ 0.8
RTN4-204ENST00000357732 MAGEB6P1A0A0J9YX57 407 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 CYP7A1P22680 504 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 SHISA4Q96DD7 197 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 ZNF804BA4D1E1 1349 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 N4BP3O15049 544 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 FXR1P51114 621 aaKnown RBP eCLIP20.01■□□□□ 0.799e-8■■■■□ 20
RTN4-204ENST00000357732 STX17P56962 302 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 PAK1Q13153 545 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 KRT31Q15323 416 aa20.01■□□□□ 0.79
RTN4-204ENST00000357732 ZNF658Q5TYW1 1059 aaPredicted RBP20.01■□□□□ 0.79
RTN4-204ENST00000357732 ARL6IP4Q66PJ3 421 aaKnown RBP20.01■□□□□ 0.79
RTN4-204ENST00000357732 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
RTN4-204ENST00000357732 CTAGE15A4D2H0 777 aa20■□□□□ 0.79
RTN4-204ENST00000357732 CTAGE8P0CG41 777 aa20■□□□□ 0.79
RTN4-204ENST00000357732 NT5C2P49902 561 aa20■□□□□ 0.79
RTN4-204ENST00000357732 TROAPQ12815 778 aa20■□□□□ 0.79
RTN4-204ENST00000357732 TMTC3Q6ZXV5 915 aa20■□□□□ 0.79
RTN4-204ENST00000357732 CTAGE6Q86UF2 777 aa20■□□□□ 0.79
RTN4-204ENST00000357732 CTAGE4Q8IX94 777 aa20■□□□□ 0.79
RTN4-204ENST00000357732 MIGA1Q8NAN2 632 aa20■□□□□ 0.79
RTN4-204ENST00000357732 ACBD3Q9H3P7 528 aa20■□□□□ 0.79
RTN4-204ENST00000357732 CTNND2Q9UQB3 1225 aa20■□□□□ 0.79
RTN4-204ENST00000357732 PDXDC2PQ6P474 469 aa20■□□□□ 0.79
RTN4-204ENST00000357732 GOLGA5Q8TBA6 731 aa20■□□□□ 0.79
RTN4-204ENST00000357732 CPLX3Q8WVH0 158 aa20■□□□□ 0.79
RTN4-204ENST00000357732 GNL3LQ9NVN8 582 aaKnown RBP20■□□□□ 0.79
RTN4-204ENST00000357732 ADAM21Q9UKJ8 722 aa20■□□□□ 0.79
RTN4-204ENST00000357732 L1RE1Q9UN81 338 aa20■□□□□ 0.79
RTN4-204ENST00000357732 XDHP47989 1333 aa20■□□□□ 0.79
RTN4-204ENST00000357732 EXOC5O00471 708 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 COPB1P53618 953 aaKnown RBP19.99■□□□□ 0.79
RTN4-204ENST00000357732 NPY5RQ15761 445 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 TCP11X2Q5H9J9 407 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 V9GY48 417 aaPredicted RBP19.99■□□□□ 0.79
RTN4-204ENST00000357732 FAM205CA6NFA0 338 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 MINDY4BA8MYZ0 360 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 MYL1P05976 194 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 MCM3P25205 808 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 ST5P78524 1137 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 PTGDRQ13258 359 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 EARS2Q5JPH6 523 aaKnown RBP19.99■□□□□ 0.79
RTN4-204ENST00000357732 ZNF662Q6ZS27 426 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 SLC35F6Q8N357 371 aa19.99■□□□□ 0.79
RTN4-204ENST00000357732 PHLPP1O60346 1717 aa19.98■□□□□ 0.79
RTN4-204ENST00000357732 H7C1D1 291 aa19.98■□□□□ 0.79
RTN4-204ENST00000357732 LONP1P36776 959 aaKnown RBP19.98■□□□□ 0.79
RTN4-204ENST00000357732 EIF5P55010 431 aaKnown RBP19.98■□□□□ 0.79
RTN4-204ENST00000357732 RRAGBQ5VZM2 374 aa19.98■□□□□ 0.79
RTN4-204ENST00000357732 WDR93Q6P2C0 686 aa19.98■□□□□ 0.79
RTN4-204ENST00000357732 RIOK1Q9BRS2 568 aaKnown RBP19.98■□□□□ 0.79
RTN4-204ENST00000357732 CNTNAP5Q8WYK1 1306 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms