RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 KRT2P35908 639 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 GYS2P54840 703 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 TEX35Q5T0J7 233 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 PPP1R3GB7ZBB8 358 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 CASP14P31944 242 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 TYW1BQ6NUM6 668 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 VPS16Q9H269 839 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 FAM205AQ6ZU69 1335 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 TADA3O75528 432 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 PLA2G4AP47712 749 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 ACRBPQ8NEB7 543 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 UBXN4Q92575 508 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 CALCOCO1Q9P1Z2 691 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 GDAQ9Y2T3 454 aa17.34■□□□□ 0.37
PTBP1-203ENST00000356948 NKRFO15226 690 aaKnown RBP eCLIP17.33■□□□□ 0.372e-8■□□□□ 10.2
PTBP1-203ENST00000356948 GNAT2P19087 354 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 PLCD1P51178 756 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 MNS1Q8NEH6 495 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 SPATA20Q8TB22 786 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 KIFC2Q96AC6 838 aa17.33■□□□□ 0.37
PTBP1-203ENST00000356948 NOL10Q9BSC4 688 aaKnown RBP17.33■□□□□ 0.37
PTBP1-203ENST00000356948 PUF60Q9UHX1 559 aaKnown RBP17.33■□□□□ 0.37
PTBP1-203ENST00000356948 LRP5O75197 1615 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 TRIM49BA6NDI0 452 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 ARHGAP6O43182 974 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 IGSF22Q8N9C0 903 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 MLKLQ8NB16 471 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 DOCK2Q92608 1830 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 PNMA6AP0CW24 399 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-203ENST00000356948 CATIPQ7Z7H3 387 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 TNFRSF25Q93038 417 aa17.33■□□□□ 0.36
PTBP1-203ENST00000356948 RNF26Q9BY78 433 aaPredicted RBP17.33■□□□□ 0.36
PTBP1-203ENST00000356948 TERF2Q15554 542 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 C10orf67Q8IYJ2 551 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 NSUN4Q96CB9 384 aaKnown RBP17.32■□□□□ 0.36
PTBP1-203ENST00000356948 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-203ENST00000356948 FAM53CQ9NYF3 392 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 BCORQ6W2J9 1755 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 STRCQ7RTU9 1775 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 SLC35G1Q2M3R5 365 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 LRRC15Q8TF66 581 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
PTBP1-203ENST00000356948 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-203ENST00000356948 TRIM10Q9UDY6 481 aa17.32■□□□□ 0.36
PTBP1-203ENST00000356948 MYH6P13533 1939 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 ZNF804BA4D1E1 1349 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 A0A1B0GTH6 734 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 USP17L3A6NCW0 530 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 GOLGA8HP0CJ92 632 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 CASQ1P31415 396 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 TAB2Q9NYJ8 693 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 PHLPP2Q6ZVD8 1323 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 NRDCO43847 1150 aa17.31■□□□□ 0.36
PTBP1-203ENST00000356948 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-203ENST00000356948 KIF2AO00139 706 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-203ENST00000356948 GYPCP04921 128 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
PTBP1-203ENST00000356948 TMTC3Q6ZXV5 915 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 NLRP5P59047 1200 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 DIXDC1Q155Q3 683 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 SH3RF1Q7Z6J0 888 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
PTBP1-203ENST00000356948 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
PTBP1-203ENST00000356948 RCSD1Q6JBY9 416 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 ZNF579Q8NAF0 562 aaKnown RBP17.3■□□□□ 0.36
PTBP1-203ENST00000356948 NEK11Q8NG66 645 aa17.3■□□□□ 0.36
PTBP1-203ENST00000356948 KDM4FA0A1W2PPD8 638 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 KCNJ6P48051 423 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 NID2Q14112 1375 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 TIAM2Q8IVF5 1701 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 AKR1B15C9JRZ8 316 aaPredicted RBP17.29■□□□□ 0.36
PTBP1-203ENST00000356948 STX10O60499 249 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 IRX3P78415 501 aaPredicted RBP17.29■□□□□ 0.36
PTBP1-203ENST00000356948 MAP3K9P80192 1104 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 PPP2R3AQ06190 1150 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 CAVIN4Q5BKX8 364 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
PTBP1-203ENST00000356948 ANAPC4Q9UJX5 808 aa17.29■□□□□ 0.36
PTBP1-203ENST00000356948 ERCC3P19447 782 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 ERVK-24P63145 666 aa17.28■□□□□ 0.36
PTBP1-203ENST00000356948 TMEM60Q9H2L4 133 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms