RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 TROVE2P10155 538 aaKnown RBP eCLIP17.74■□□□□ 0.43
RXRA-201ENST00000356384 TNNI1P19237 187 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 APPBP2Q92624 585 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 MAIP1Q8WWC4 291 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 RSAD2Q8WXG1 361 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 CFBP00751 764 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 DNM2P50570 870 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 NXNQ6DKJ4 435 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 U2AF1L4Q8WU68 220 aaKnown RBP17.74■□□□□ 0.43
RXRA-201ENST00000356384 RAB17Q9H0T7 212 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 HAUS2Q9NVX0 235 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 hCG_1642624A0A1W2PR95 340 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 OTUD7AQ8TE49 926 aaPredicted RBP17.74■□□□□ 0.43
RXRA-201ENST00000356384 VCX3AQ9NNX9 186 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 ST7Q9NRC1 585 aa17.74■□□□□ 0.43
RXRA-201ENST00000356384 MGEA5O60502 916 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 PPFIA4O75335 1185 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 IFNB1P01574 187 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 KRT12Q99456 494 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 MAGI3Q5TCQ9 1506 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 RNMTO43148 476 aaKnown RBP17.73■□□□□ 0.43
RXRA-201ENST00000356384 MUM1Q2TAK8 710 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 KRT40Q6A162 431 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 P3H4Q92791 437 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 CTNNA1P35221 906 aaKnown RBP17.73■□□□□ 0.43
RXRA-201ENST00000356384 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
RXRA-201ENST00000356384 PARP2Q9UGN5 583 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 BCAP29Q9UHQ4 241 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 AMFRQ9UKV5 643 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 RASSF2P50749 326 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 GBP5Q96PP8 586 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 LSM14BQ9BX40 385 aaKnown RBP17.73■□□□□ 0.43
RXRA-201ENST00000356384 ANO3Q9BYT9 981 aa17.73■□□□□ 0.43
RXRA-201ENST00000356384 ZBED4O75132 1171 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 PPP4R1Q8TF05 950 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 ANKFY1Q9P2R3 1169 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 LRRC43Q8N309 656 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 FLT4P35916 1363 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 ABCB4P21439 1286 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 KMT5BQ4FZB7 885 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 CCDC84Q86UT8 332 aaPredicted RBP17.72■□□□□ 0.43
RXRA-201ENST00000356384 FAM71BQ8TC56 605 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 GGA1Q9UJY5 639 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 PCDHB13Q9Y5F0 798 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 GADD45BO75293 160 aaPredicted RBP17.72■□□□□ 0.43
RXRA-201ENST00000356384 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
RXRA-201ENST00000356384 MYRIPQ8NFW9 859 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 KSR1Q8IVT5 923 aa17.72■□□□□ 0.43
RXRA-201ENST00000356384 GABPB1Q06547 395 aaPredicted RBP17.71■□□□□ 0.43
RXRA-201ENST00000356384 PRR16Q569H4 304 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 SHANK2Q9UPX8 1470 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 TAF5LO75529 589 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 RFX1P22670 979 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 PNOCQ13519 176 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 TRIM68Q6AZZ1 485 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 TPH2Q8IWU9 490 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 USH1CQ9Y6N9 552 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 SMIM24O75264 130 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 CDC37L1Q7L3B6 337 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 G2E3Q7L622 706 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 CCDC13Q8IYE1 715 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 SPDYE16A6NNV3 312 aaPredicted RBP17.71■□□□□ 0.43
RXRA-201ENST00000356384 BAG2O95816 211 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 KRT81Q14533 505 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 CAPN12Q6ZSI9 719 aa17.71■□□□□ 0.43
RXRA-201ENST00000356384 M0QZ92 97 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 SCYL2Q6P3W7 929 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 PHACTR3Q96KR7 559 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 EYA1Q99502 592 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 TCP10Q12799 353 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 KLHL14Q9P2G3 628 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 YARSP54577 528 aaKnown RBP17.7■□□□□ 0.42
RXRA-201ENST00000356384 PTPROQ16827 1216 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
RXRA-201ENST00000356384 WHAMMQ8TF30 809 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 EFCC1Q9HA90 598 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 STMN1P16949 149 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 GNGT1P63211 74 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 VPS41P49754 854 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 MICAL1Q8TDZ2 1067 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 NUCKS1Q9H1E3 243 aaKnown RBP17.7■□□□□ 0.42
RXRA-201ENST00000356384 RAB20Q9NX57 234 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 VPS54Q9P1Q0 977 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 SERTAD1Q9UHV2 236 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 PPME1Q9Y570 386 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 NDUFB9Q9Y6M9 179 aa17.7■□□□□ 0.42
RXRA-201ENST00000356384 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 ADCY8P40145 1251 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 CYP2J2P51589 502 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 PHLDB3Q6NSJ2 640 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
RXRA-201ENST00000356384 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms