RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 MFSD14CQ5VZR4 134 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 DYNLL2Q96FJ2 89 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 CCDC17Q96LX7 622 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 APBA2Q99767 749 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 ECHDC1Q9NTX5 307 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
CAPN3-204ENST00000356316 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
CAPN3-204ENST00000356316 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 USP17L21D6R901 530 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 STRNO43815 780 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 SMARCA5O60264 1052 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-204ENST00000356316 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 DPP9Q86TI2 863 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 LPAR1Q92633 364 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 USP6NLQ92738 828 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 OGDHLQ9ULD0 1010 aa12.81□□□□□ -0.36
CAPN3-204ENST00000356316 MYH7P12883 1935 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 A0A1W2PRG0 241 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 CNMDO75829 334 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 CNGA1P29973 690 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 CDK8P49336 464 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 EVX2Q03828 476 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 ICA1Q05084 483 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 PLS1Q14651 629 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 CCL14Q16627 93 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 SLFNL1Q499Z3 407 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 POTEEQ6S8J3 1075 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
CAPN3-204ENST00000356316 SLC5A4Q9NY91 659 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
CAPN3-204ENST00000356316 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
CAPN3-204ENST00000356316 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
CAPN3-204ENST00000356316 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-204ENST00000356316 RAD21O60216 631 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 FLOT1O75955 427 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 AKR1B1P15121 316 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 CCND3P30281 292 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-204ENST00000356316 LRRFIP1Q32MZ4 808 aaKnown RBP12.79□□□□□ -0.36
CAPN3-204ENST00000356316 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 MB21D1Q8N884 522 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 KANSL2Q9H9L4 492 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 TMX2Q9Y320 296 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 DNAH12Q6ZR08 3092 aa12.79□□□□□ -0.36
CAPN3-204ENST00000356316 CYP2D7A0A087X1C5 515 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 A0A1W2PPC1 479 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 MSCO60682 206 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 GRB14Q14449 540 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 CTR9Q6PD62 1173 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 C16orf86Q6ZW13 317 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 NCAPG2Q86XI2 1143 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 MOV10L1Q9BXT6 1211 aaKnown RBP12.78□□□□□ -0.36
CAPN3-204ENST00000356316 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
CAPN3-204ENST00000356316 MROH8Q9H579 483 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 ARPP21Q9UBL0 812 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-204ENST00000356316 STAP2Q9UGK3 403 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 CEP290O15078 2479 aa12.78□□□□□ -0.36
CAPN3-204ENST00000356316 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.37
CAPN3-204ENST00000356316 APPP05067 770 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-204ENST00000356316 HOXC6P09630 235 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.37
CAPN3-204ENST00000356316 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 SHCBP1Q8NEM2 672 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 ZNF287Q9HBT7 754 aa12.77□□□□□ -0.37
CAPN3-204ENST00000356316 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-204ENST00000356316 ERC2O15083 957 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
CAPN3-204ENST00000356316 CHGBP05060 677 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 GNAT2P19087 354 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 ERCC3P19447 782 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 ADORA2AP29274 412 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 LHX8Q68G74 356 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
CAPN3-204ENST00000356316 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
CAPN3-204ENST00000356316 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
CAPN3-204ENST00000356316 ZMYND8Q9ULU4 1186 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-204ENST00000356316 SLC25A27O95847 323 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 FCER1AP12319 257 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 CYP2C19P33261 490 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 TDO2P48775 406 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-204ENST00000356316 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
CAPN3-204ENST00000356316 KIAA1755Q5JYT7 1200 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms