RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 IRF6O14896 467 aa28.39■■■□□ 2.14
HMGA2-201ENST00000354636 GJA5P36382 358 aa28.39■■■□□ 2.14
HMGA2-201ENST00000354636 BACE1P56817 501 aa28.39■■■□□ 2.14
HMGA2-201ENST00000354636 HHIPL1Q96JK4 782 aa28.39■■■□□ 2.14
HMGA2-201ENST00000354636 LARP6Q9BRS8 491 aaKnown RBP28.39■■■□□ 2.14
HMGA2-201ENST00000354636 TRIM75PA6NK02 468 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 CD2BP2O95400 341 aaKnown RBP28.38■■■□□ 2.13
HMGA2-201ENST00000354636 RGMBQ6NW40 437 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 APOA5Q6Q788 366 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 PAXIP1Q6ZW49 1069 aaPredicted RBP28.38■■■□□ 2.13
HMGA2-201ENST00000354636 ZNF654Q8IZM8 581 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 WNK4Q96J92 1243 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 FEZ1Q99689 392 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 SLC12A7Q9Y666 1083 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 KLF18A0A0U1RQI7 1052 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 F5H6K3 240 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 KLRC3Q07444 240 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 TROAPQ12815 778 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 MTMR2Q13614 643 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 CATIPQ7Z7H3 387 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 GMCL1P1Q8NEA9 526 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 KCNH4Q9UQ05 1017 aa28.38■■■□□ 2.13
HMGA2-201ENST00000354636 C19orf81C9J6K1 198 aa28.37■■■□□ 2.13
HMGA2-201ENST00000354636 CXCL11O14625 94 aa28.37■■■□□ 2.13
HMGA2-201ENST00000354636 VCPKMTQ9H867 229 aa28.37■■■□□ 2.13
HMGA2-201ENST00000354636 TSHZ2Q9NRE2 1034 aa28.37■■■□□ 2.13
HMGA2-201ENST00000354636 TPCN1Q9ULQ1 816 aa28.37■■■□□ 2.13
HMGA2-201ENST00000354636 USP14P54578 494 aa28.36■■■□□ 2.13
HMGA2-201ENST00000354636 MKRN3Q13064 507 aaKnown RBP28.36■■■□□ 2.13
HMGA2-201ENST00000354636 ZYXQ15942 572 aaKnown RBP28.36■■■□□ 2.13
HMGA2-201ENST00000354636 SH3D19Q5HYK7 790 aa28.36■■■□□ 2.13
HMGA2-201ENST00000354636 SPRYD7Q5W111 196 aa28.36■■■□□ 2.13
HMGA2-201ENST00000354636 ZNF274Q96GC6 653 aaPredicted RBP28.36■■■□□ 2.13
HMGA2-201ENST00000354636 GOPCQ9HD26 462 aa28.36■■■□□ 2.13
HMGA2-201ENST00000354636 RAD21O60216 631 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 DDAH1O94760 285 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 ZBTB48P10074 688 aaPredicted RBP28.35■■■□□ 2.13
HMGA2-201ENST00000354636 MCM2P49736 904 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 KIAA1755Q5JYT7 1200 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 SYNE3Q6ZMZ3 975 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 NOL8Q76FK4 1167 aaKnown RBP28.35■■■□□ 2.13
HMGA2-201ENST00000354636 RASAL3Q86YV0 1011 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 MYL10Q9BUA6 226 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 EMILIN3Q9NT22 766 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 LIMCH1Q9UPQ0 1083 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 PTPRFP10586 1907 aa28.35■■■□□ 2.13
HMGA2-201ENST00000354636 NDUFB10O96000 172 aa28.34■■■□□ 2.13
HMGA2-201ENST00000354636 PDIA3P30101 505 aaKnown RBP28.34■■■□□ 2.13
HMGA2-201ENST00000354636 C1QTNF8P60827 252 aa28.34■■■□□ 2.13
HMGA2-201ENST00000354636 GRM1Q13255 1194 aa28.34■■■□□ 2.13
HMGA2-201ENST00000354636 USP17L2Q6R6M4 530 aa28.34■■■□□ 2.13
HMGA2-201ENST00000354636 ZBTB43O43298 467 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 SNHG28P0DPA3 235 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 PDHBP11177 359 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 RCAN1P53805 252 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 DGKZQ13574 1117 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 SLFN13Q68D06 897 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 SNX21Q969T3 373 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 C12orf42Q96LP6 360 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 A0A0G2JLL6 359 aaPredicted RBP28.33■■■□□ 2.13
HMGA2-201ENST00000354636 CALM1P0DP23 149 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 CALM2P0DP24 149 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 CALM3P0DP25 149 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 HMGCS2P54868 508 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 DEFB115Q30KQ5 88 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 RASGRP2Q7LDG7 609 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 PRRT2Q7Z6L0 340 aaPredicted RBP28.33■■■□□ 2.13
HMGA2-201ENST00000354636 LPAR1Q92633 364 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 GMCL1Q96IK5 515 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 MAP3K14Q99558 947 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 HPS5Q9UPZ3 1129 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 MTMR7Q9Y216 660 aa28.33■■■□□ 2.13
HMGA2-201ENST00000354636 RASSF10A6NK89 507 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 SLC10A3P09131 477 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 RXRAP19793 462 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 ME3Q16798 604 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 MICU3Q86XE3 530 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 RAB11FIP4Q86YS3 637 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 SPICE1Q8N0Z3 855 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 NUP133Q8WUM0 1156 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 CCDC102AQ96A19 550 aa28.32■■■□□ 2.12
HMGA2-201ENST00000354636 NAP1L2Q9ULW6 460 aaPredicted RBP28.32■■■□□ 2.12
HMGA2-201ENST00000354636 GOLGA8BA8MQT2 603 aa28.31■■■□□ 2.12
HMGA2-201ENST00000354636 FAM155AB1AL88 458 aaPredicted RBP28.31■■■□□ 2.12
HMGA2-201ENST00000354636 SNAPC2Q13487 334 aa28.31■■■□□ 2.12
HMGA2-201ENST00000354636 DCAF4Q8WV16 495 aa28.31■■■□□ 2.12
HMGA2-201ENST00000354636 MS4A4AQ96JQ5 239 aa28.31■■■□□ 2.12
HMGA2-201ENST00000354636 LARGE1O95461 756 aa28.3■■■□□ 2.12
HMGA2-201ENST00000354636 HTRA3P83110 453 aa28.3■■■□□ 2.12
HMGA2-201ENST00000354636 FANCBQ8NB91 859 aa28.3■■■□□ 2.12
HMGA2-201ENST00000354636 CHMP4CQ96CF2 233 aa28.3■■■□□ 2.12
HMGA2-201ENST00000354636 TMOD4Q9NZQ9 345 aa28.3■■■□□ 2.12
HMGA2-201ENST00000354636 NID2Q14112 1375 aa28.3■■■□□ 2.12
HMGA2-201ENST00000354636 SLC1A4P43007 532 aa28.29■■■□□ 2.12
HMGA2-201ENST00000354636 GTF2A2P52657 109 aa28.29■■■□□ 2.12
HMGA2-201ENST00000354636 MOGSQ13724 837 aa28.29■■■□□ 2.12
HMGA2-201ENST00000354636 GRM4Q14833 912 aa28.29■■■□□ 2.12
HMGA2-201ENST00000354636 CYP4F22Q6NT55 531 aa28.29■■■□□ 2.12
HMGA2-201ENST00000354636 ZSCAN31Q96LW9 406 aaPredicted RBP28.29■■■□□ 2.12
HMGA2-201ENST00000354636 WDR46O15213 610 aaKnown RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms