RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 LPAR1Q92633 364 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 CFHR5Q9BXR6 569 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
SEC13-202ENST00000350697 VCAM1P19320 739 aa16.43■□□□□ 0.22
SEC13-202ENST00000350697 NOVP48745 357 aa16.43■□□□□ 0.22
SEC13-202ENST00000350697 TTC14Q96N46 770 aa16.43■□□□□ 0.22
SEC13-202ENST00000350697 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
SEC13-202ENST00000350697 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
SEC13-202ENST00000350697 HOXA7P31268 230 aaPredicted RBP16.42■□□□□ 0.22
SEC13-202ENST00000350697 HSPA4P34932 840 aa16.42■□□□□ 0.22
SEC13-202ENST00000350697 CRHR2Q13324 411 aa16.42■□□□□ 0.22
SEC13-202ENST00000350697 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
SEC13-202ENST00000350697 PARK7Q99497 189 aaKnown RBP16.42■□□□□ 0.22
SEC13-202ENST00000350697 UBAC1Q9BSL1 405 aa16.42■□□□□ 0.22
SEC13-202ENST00000350697 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
SEC13-202ENST00000350697 FOXN1O15353 648 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 TBC1D8O95759 1140 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 OSBPP22059 807 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 CYB5R4Q7L1T6 521 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 DGKHQ86XP1 1220 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 LRRC47Q8N1G4 583 aaKnown RBP16.41■□□□□ 0.22
SEC13-202ENST00000350697 KCNB2Q92953 911 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
SEC13-202ENST00000350697 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
SEC13-202ENST00000350697 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L11C9JVI0 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L18D6R9N7 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L22D6RA61 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L17D6RBQ6 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L19D6RCP7 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L20D6RJB6 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 F5H6K3 240 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 WDR46O15213 610 aaKnown RBP16.4■□□□□ 0.22
SEC13-202ENST00000350697 RAD21O60216 631 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 CYP2C8P10632 490 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
SEC13-202ENST00000350697 IRX3P78415 501 aaPredicted RBP16.4■□□□□ 0.22
SEC13-202ENST00000350697 KLRC3Q07444 240 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 USP17L24Q0WX57 530 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 KRT32Q14532 448 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 C8orf34Q49A92 452 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 RCSD1Q6JBY9 416 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 MB21D2Q8IYB1 491 aaPredicted RBP16.4■□□□□ 0.22
SEC13-202ENST00000350697 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
SEC13-202ENST00000350697 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
SEC13-202ENST00000350697 TSKSQ9UJT2 592 aa16.4■□□□□ 0.22
SEC13-202ENST00000350697 TNKSO95271 1327 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 TLR2O60603 784 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 NDUFB10O96000 172 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 MCCP23508 829 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 CTCFP49711 727 aaPredicted RBP16.39■□□□□ 0.21
SEC13-202ENST00000350697 CATSPERGQ6ZRH7 1159 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
SEC13-202ENST00000350697 SMCR8Q8TEV9 937 aaPredicted RBP16.39■□□□□ 0.21
SEC13-202ENST00000350697 ANKS1AQ92625 1134 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 R3HDMLQ9H3Y0 253 aa16.39■□□□□ 0.21
SEC13-202ENST00000350697 HSPA8P11142 646 aaKnown RBP16.38■□□□□ 0.21
SEC13-202ENST00000350697 MCM5P33992 734 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
SEC13-202ENST00000350697 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
SEC13-202ENST00000350697 SLFN13Q68D06 897 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 TANGO6Q9C0B7 1094 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 SNX14Q9Y5W7 946 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
SEC13-202ENST00000350697 ERICH2A1L162 156 aa16.37■□□□□ 0.21
SEC13-202ENST00000350697 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
SEC13-202ENST00000350697 ANTXR2P58335 489 aa16.37■□□□□ 0.21
SEC13-202ENST00000350697 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
SEC13-202ENST00000350697 GPR25O00155 361 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 PRC1O43663 620 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
SEC13-202ENST00000350697 GCLCP48506 637 aaPredicted RBP16.36■□□□□ 0.21
SEC13-202ENST00000350697 HERVK_113P62684 666 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 SEC23AQ15436 765 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 FAM83BQ5T0W9 1011 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
SEC13-202ENST00000350697 CHST3Q7LGC8 479 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 GMCL1Q96IK5 515 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 FLOT1O75955 427 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 SEC24BO95487 1268 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 SLC1A4P43007 532 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 LBX1P52954 281 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 COG2Q14746 738 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 PNMA1Q8ND90 353 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 GTF3C2Q8WUA4 911 aaPredicted RBP16.36■□□□□ 0.21
SEC13-202ENST00000350697 TMEM87BQ96K49 555 aa16.36■□□□□ 0.21
SEC13-202ENST00000350697 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms