RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SETBP1Q9Y6X0 1596 aa9.62□□□□□ -0.87
UBE2D3-204ENST00000349311 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 FURINP09958 794 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 BMP3P12645 472 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 XRCC6P12956 609 aaKnown RBP eCLIP9.61□□□□□ -0.874e-17■□□□□ 10.6
UBE2D3-204ENST00000349311 LMNB2Q03252 620 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 SGO2Q562F6 1265 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 GGT6Q6P531 493 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 SEZ6L2Q6UXD5 910 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 CLEC10AQ8IUN9 316 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 ZNF428Q96B54 188 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 FAM83CQ9BQN1 747 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 FAM105AQ9NUU6 356 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 ZMYM3Q14202 1370 aa9.61□□□□□ -0.87
UBE2D3-204ENST00000349311 NTF4P34130 210 aa9.6□□□□□ -0.87
UBE2D3-204ENST00000349311 PWP1Q13610 501 aa9.6□□□□□ -0.87
UBE2D3-204ENST00000349311 MAP3K11Q16584 847 aa9.6□□□□□ -0.87
UBE2D3-204ENST00000349311 COPRSQ9NQ92 184 aa9.6□□□□□ -0.87
UBE2D3-204ENST00000349311 NEXMIFQ5QGS0 1516 aa9.6□□□□□ -0.87
UBE2D3-204ENST00000349311 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
UBE2D3-204ENST00000349311 RPGRIP1LQ68CZ1 1315 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 C3P01024 1663 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 FAM221AA4D161 298 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 GFRA2O00451 464 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 TSNAXIP1Q2TAA8 658 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 CYFIP1Q7L576 1253 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 METTL16Q86W50 562 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 ATXN3LQ9H3M9 355 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 KBTBD4Q9NVX7 518 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 SLC52A1Q9NWF4 448 aa9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-204ENST00000349311 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 ADAM23O75077 832 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 PF4P02776 101 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 PTMSP20962 102 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 MAP4P27816 1152 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 RBM10P98175 930 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 CAMK2GQ13555 558 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 INPP5AQ14642 412 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 HS2ST1Q7LGA3 356 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 DYMQ7RTS9 669 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 MTERF4Q7Z6M4 381 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 SLC51AQ86UW1 340 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 RELL1Q8IUW5 271 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 RNF214Q8ND24 703 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 TRIM44Q96DX7 344 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 SEMA6CQ9H3T2 930 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 MYH16Q9H6N6 1097 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 PCDHA4Q9UN74 947 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 AP4E1Q9UPM8 1137 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 SNCAIPQ9Y6H5 919 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 PARD3Q8TEW0 1356 aa9.58□□□□□ -0.88
UBE2D3-204ENST00000349311 GAS2O43903 313 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 GREM1O60565 184 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 ASPAP45381 313 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 SEPT6Q14141 434 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 LRFN4Q6PJG9 635 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 BEND4Q6ZU67 534 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 FBLIM1Q8WUP2 373 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 MIR1-1HGQ9H1L0 117 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 C7orf69Q9H7B7 122 aa9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-204ENST00000349311 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 CILPO75339 1184 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 MCM4P33991 863 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 ZNF76P36508 570 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 CDK8P49336 464 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 SMAP1Q8IYB5 467 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 GATAD2BQ8WXI9 593 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 GATA6Q92908 595 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 ACSBG1Q96GR2 724 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 STOML1Q9UBI4 398 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 TACC3Q9Y6A5 838 aa9.56□□□□□ -0.88
UBE2D3-204ENST00000349311 NINLQ9Y2I6 1382 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 HMX2A2RU54 273 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 GBP2P32456 591 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 USP11P51784 963 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 ANTXR1Q9H6X2 564 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 PRDM4Q9UKN5 801 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 ADAMTSL3P82987 1691 aa9.55□□□□□ -0.88
UBE2D3-204ENST00000349311 NLRP1Q9C000 1473 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 SETD1AO15047 1707 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 DCDC2CA8MYV0 355 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 F6X3S4 739 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 FANCGO15287 622 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 PLIN1O60240 522 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 RPL6Q02878 288 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 RGL3Q3MIN7 710 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 FBXL19Q6PCT2 694 aa9.54□□□□□ -0.88
UBE2D3-204ENST00000349311 C12orf40Q86WS4 652 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms