RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CYP2D7A0A087X1C5 515 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 TTLL1O95922 423 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 UBASH3AP57075 661 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 KRT40Q6A162 431 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 GGA3Q9NZ52 723 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 FRMD4BQ9Y2L6 1034 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 FMNL3Q8IVF7 1028 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 FHDC1Q9C0D6 1143 aaPredicted RBP18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 SCAF8Q9UPN6 1271 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 LRRIQ1Q96JM4 1722 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 DTNBO60941 627 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 DNM3Q9UQ16 869 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 GOLGA6L9A6NEM1 432 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 BMP3P12645 472 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 PAFAH1B1P43034 410 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 ANGEL2Q5VTE6 544 aaKnown RBP18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 TICAM2Q86XR7 235 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 USP25Q9UHP3 1055 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 PNMA8AQ86V59 439 aaPredicted RBP18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 CUTAO60888 179 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 SLC16A2P36021 539 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 STYK1Q6J9G0 422 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 MSANTD4Q8NCY6 345 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 AKR1B10O60218 316 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
SMARCA4-201ENST00000344626 LPXNO60711 386 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 SKIDA1Q1XH10 827 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 CNNM4Q6P4Q7 775 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 COA7Q96BR5 231 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 POLA2Q14181 598 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 RASA3Q14644 834 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 OTUD6AQ7L8S5 288 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 NRKQ7Z2Y5 1582 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 GAS7O60861 476 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 NOP2P46087 812 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 SAMD7Q7Z3H4 446 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 TTC12Q9H892 705 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 ADD3Q9UEY8 706 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 CELF2O95319 508 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 TGFB2P61812 414 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 Q3C1V9 767 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 SNX29Q8TEQ0 813 aa18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-201ENST00000344626 CASQ1P31415 396 aa18.39■□□□□ 0.54
SMARCA4-201ENST00000344626 FNBP1Q96RU3 617 aa18.39■□□□□ 0.54
SMARCA4-201ENST00000344626 MRVI1Q9Y6F6 885 aa18.39■□□□□ 0.54
SMARCA4-201ENST00000344626 GBP2P32456 591 aaPredicted RBP18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 LRSAM1Q6UWE0 723 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 PLSCR1O15162 318 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 VEGFAP15692 232 aaPredicted RBP18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 ZSCAN23Q3MJ62 389 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 ANO6Q4KMQ2 910 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 SH3RF3Q8TEJ3 882 aaPredicted RBP18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 IGBP1P78318 339 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 EHBP1Q8NDI1 1231 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 PLVAPQ9BX97 442 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 KCNJ14Q9UNX9 436 aa18.39■□□□□ 0.53
SMARCA4-201ENST00000344626 CYLC1P35663 651 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 MCAMP43121 646 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 CTNNBL1Q8WYA6 563 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 SUGCTQ9HAC7 445 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 PTH1RQ03431 593 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 EPB41P11171 864 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 UBXN2AP68543 259 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 FAM160A1Q05DH4 1040 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 SF3B3Q15393 1217 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 NT5C3AQ9H0P0 336 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 ELP3Q9H9T3 547 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 CEP83Q9Y592 693 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 HOXD10P28358 340 aa18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 SETQ01105 290 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 TAF1CQ15572 869 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-201ENST00000344626 MACROD2A1Z1Q3 448 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 TMCO5BA8MYB1 307 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 FAM84BQ96KN1 310 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 PSMD14O00487 310 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 SEC24BO95487 1268 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 BLIDQ8IZY5 108 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 YY1P25490 414 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 STAT2P52630 851 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 STRIP1Q5VSL9 837 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 SEPT14Q6ZU15 432 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 CALUO43852 315 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-201ENST00000344626 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms