RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 MTMR7Q9Y216 660 aa27.29■■□□□ 1.96
NELFB-201ENST00000343053 FXR1P51114 621 aaKnown RBP eCLIP27.28■■□□□ 1.96
NELFB-201ENST00000343053 MYH13Q9UKX3 1938 aa27.28■■□□□ 1.96
NELFB-201ENST00000343053 DOT1LQ8TEK3 1739 aa27.28■■□□□ 1.96
NELFB-201ENST00000343053 TROAPQ12815 778 aa27.28■■□□□ 1.96
NELFB-201ENST00000343053 ACRBPQ8NEB7 543 aa27.28■■□□□ 1.96
NELFB-201ENST00000343053 VPS16Q9H269 839 aa27.28■■□□□ 1.96
NELFB-201ENST00000343053 XDHP47989 1333 aa27.28■■□□□ 1.96
NELFB-201ENST00000343053 PPP1R3GB7ZBB8 358 aa27.27■■□□□ 1.96
NELFB-201ENST00000343053 CYP2D6P10635 497 aa27.27■■□□□ 1.96
NELFB-201ENST00000343053 NPY5RQ15761 445 aa27.27■■□□□ 1.96
NELFB-201ENST00000343053 IQCA1Q86XH1 822 aa27.27■■□□□ 1.96
NELFB-201ENST00000343053 ADD3Q9UEY8 706 aaKnown RBP27.27■■□□□ 1.96
NELFB-201ENST00000343053 CCDC24Q8N4L8 307 aa27.27■■□□□ 1.96
NELFB-201ENST00000343053 SRBD1Q8N5C6 995 aaKnown RBP27.27■■□□□ 1.96
NELFB-201ENST00000343053 DISP2A7MBM2 1401 aa27.27■■□□□ 1.96
NELFB-201ENST00000343053 PARD6BQ9BYG5 372 aa27.26■■□□□ 1.96
NELFB-201ENST00000343053 ADGRG1Q9Y653 693 aa27.26■■□□□ 1.96
NELFB-201ENST00000343053 DUOX1Q9NRD9 1551 aa27.26■■□□□ 1.95
NELFB-201ENST00000343053 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
NELFB-201ENST00000343053 GOLGA6L9A6NEM1 432 aa27.26■■□□□ 1.95
NELFB-201ENST00000343053 ERFEQ4G0M1 354 aa27.26■■□□□ 1.95
NELFB-201ENST00000343053 PRPF3O43395 683 aaKnown RBP27.25■■□□□ 1.95
NELFB-201ENST00000343053 RRAGBQ5VZM2 374 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 CC2D1AQ6P1N0 951 aaPredicted RBP27.25■■□□□ 1.95
NELFB-201ENST00000343053 CTR9Q6PD62 1173 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 TBC1D8O95759 1140 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 GYPCP04921 128 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 SH3RF1Q7Z6J0 888 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 RASGRP4Q8TDF6 673 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 AK7Q96M32 723 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 TAB2Q9NYJ8 693 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 PHLPP1O60346 1717 aa27.25■■□□□ 1.95
NELFB-201ENST00000343053 LOC102724428A0A0B4J2F2 783 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 RNF225M0QZC1 329 aaPredicted RBP27.24■■□□□ 1.95
NELFB-201ENST00000343053 SIK1P57059 783 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 ZNF569Q5MCW4 686 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 CDC5LQ99459 802 aaKnown RBP27.24■■□□□ 1.95
NELFB-201ENST00000343053 BRMS1Q9HCU9 246 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 CNTNAP5Q8WYK1 1306 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 MFAP3LO75121 409 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 NLRP5P59047 1200 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 CDKAL1Q5VV42 579 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 BCL9LQ86UU0 1499 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 IL17AQ16552 155 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 TMTC3Q6ZXV5 915 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 MTRQ99707 1265 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 TFCP2L1Q9NZI6 479 aa27.24■■□□□ 1.95
NELFB-201ENST00000343053 GYS2P54840 703 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 ANKRD18AQ8IVF6 992 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 GPKOWQ92917 476 aaPredicted RBP eCLIP27.23■■□□□ 1.95
NELFB-201ENST00000343053 ANAPC4Q9UJX5 808 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 PANX2Q96RD6 677 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 PLIN2Q99541 437 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 GDAQ9Y2T3 454 aa27.23■■□□□ 1.95
NELFB-201ENST00000343053 N4BP3O15049 544 aa27.22■■□□□ 1.95
NELFB-201ENST00000343053 KRT31Q15323 416 aa27.22■■□□□ 1.95
NELFB-201ENST00000343053 PARP10Q53GL7 1025 aa27.22■■□□□ 1.95
NELFB-201ENST00000343053 RSRC2Q7L4I2 434 aaKnown RBP27.22■■□□□ 1.95
NELFB-201ENST00000343053 CELF1Q92879 486 aaKnown RBP27.22■■□□□ 1.95
NELFB-201ENST00000343053 TNFRSF25Q93038 417 aa27.22■■□□□ 1.95
NELFB-201ENST00000343053 GNL3LQ9NVN8 582 aaKnown RBP27.22■■□□□ 1.95
NELFB-201ENST00000343053 CTCFLQ8NI51 663 aaPredicted RBP27.22■■□□□ 1.95
NELFB-201ENST00000343053 FERMT2Q96AC1 680 aa27.22■■□□□ 1.95
NELFB-201ENST00000343053 RCAN1P53805 252 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 FILIP1LQ4L180 1135 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 GPR161Q8N6U8 529 aaKnown RBP27.21■■□□□ 1.95
NELFB-201ENST00000343053 GOLGA1Q92805 767 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 EEF2KMTQ96G04 330 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 ZNF804BA4D1E1 1349 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 PES1O00541 588 aaKnown RBP27.21■■□□□ 1.95
NELFB-201ENST00000343053 PBX1P40424 430 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 GSDMAQ96QA5 445 aa27.21■■□□□ 1.95
NELFB-201ENST00000343053 OAS2P29728 719 aaKnown RBP27.2■■□□□ 1.95
NELFB-201ENST00000343053 ATP2C1P98194 919 aaPredicted RBP27.2■■□□□ 1.95
NELFB-201ENST00000343053 CAVIN4Q5BKX8 364 aa27.2■■□□□ 1.95
NELFB-201ENST00000343053 FAM84BQ96KN1 310 aaPredicted RBP27.2■■□□□ 1.95
NELFB-201ENST00000343053 ADAMTS2O95450 1211 aa27.2■■□□□ 1.94
NELFB-201ENST00000343053 PRDX5P30044 214 aa27.2■■□□□ 1.94
NELFB-201ENST00000343053 ERVK-24P63145 666 aa27.2■■□□□ 1.94
NELFB-201ENST00000343053 NEK11Q8NG66 645 aa27.2■■□□□ 1.94
NELFB-201ENST00000343053 NUP88Q99567 741 aaPredicted RBP27.2■■□□□ 1.94
NELFB-201ENST00000343053 MTA3Q9BTC8 594 aa27.2■■□□□ 1.94
NELFB-201ENST00000343053 TRIM49BA6NDI0 452 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 PP2D1A8MPX8 630 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 KIF5CO60282 957 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 CHMP4BP1P59074 171 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 ST5P78524 1137 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 KIF4BQ2VIQ3 1234 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 SLC51AQ86UW1 340 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 SLC35F6Q8N357 371 aa27.19■■□□□ 1.94
NELFB-201ENST00000343053 RBM28Q9NW13 759 aaKnown RBP27.19■■□□□ 1.94
NELFB-201ENST00000343053 MECOMQ03112 1051 aa27.18■■□□□ 1.94
NELFB-201ENST00000343053 E2F4Q16254 413 aa27.18■■□□□ 1.94
NELFB-201ENST00000343053 ARFGAP3Q9NP61 516 aa27.18■■□□□ 1.94
NELFB-201ENST00000343053 MINPP1Q9UNW1 487 aa27.18■■□□□ 1.94
NELFB-201ENST00000343053 GTF2E1P29083 439 aaPredicted RBP27.18■■□□□ 1.94
NELFB-201ENST00000343053 FAM205AQ6ZU69 1335 aa27.18■■□□□ 1.94
NELFB-201ENST00000343053 TPM1P09493 284 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms