RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 KIAA1755Q5JYT7 1200 aa25.87■■□□□ 1.73
RBM38-201ENST00000342690 CLIP2Q9UDT6 1046 aa25.87■■□□□ 1.73
RBM38-201ENST00000342690 SNX14Q9Y5W7 946 aa25.87■■□□□ 1.73
RBM38-201ENST00000342690 TBC1D8O95759 1140 aa25.86■■□□□ 1.73
RBM38-201ENST00000342690 RASEFQ8IZ41 740 aa25.86■■□□□ 1.73
RBM38-201ENST00000342690 CFHR5Q9BXR6 569 aa25.86■■□□□ 1.73
RBM38-201ENST00000342690 VCPKMTQ9H867 229 aa25.86■■□□□ 1.73
RBM38-201ENST00000342690 TCP11L1Q9NUJ3 509 aa25.86■■□□□ 1.73
RBM38-201ENST00000342690 SLC45A1Q9Y2W3 748 aa25.86■■□□□ 1.73
RBM38-201ENST00000342690 VCAM1P19320 739 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 NOVP48745 357 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 CRHR2Q13324 411 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 MKL1Q969V6 931 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 R3HDMLQ9H3Y0 253 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 ZSWIM5Q9P217 1185 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 PCNTO95613 3336 aa25.85■■□□□ 1.73
RBM38-201ENST00000342690 PPP4R3BQ5MIZ7 849 aa25.84■■□□□ 1.73
RBM38-201ENST00000342690 CYB5R4Q7L1T6 521 aa25.84■■□□□ 1.73
RBM38-201ENST00000342690 LRRC47Q8N1G4 583 aaKnown RBP25.84■■□□□ 1.73
RBM38-201ENST00000342690 ZKSCAN3Q9BRR0 538 aa25.84■■□□□ 1.73
RBM38-201ENST00000342690 STX8Q9UNK0 236 aa25.84■■□□□ 1.73
RBM38-201ENST00000342690 HSPA8P11142 646 aaKnown RBP25.83■■□□□ 1.73
RBM38-201ENST00000342690 ANAPC15P60006 121 aa25.83■■□□□ 1.73
RBM38-201ENST00000342690 IQCA1Q86XH1 822 aa25.83■■□□□ 1.73
RBM38-201ENST00000342690 SPICE1Q8N0Z3 855 aa25.83■■□□□ 1.73
RBM38-201ENST00000342690 NEK1Q96PY6 1258 aa25.83■■□□□ 1.73
RBM38-201ENST00000342690 PARK7Q99497 189 aaKnown RBP25.83■■□□□ 1.73
RBM38-201ENST00000342690 ZFYVE28Q9HCC9 887 aa25.83■■□□□ 1.73
RBM38-201ENST00000342690 GOPCQ9HD26 462 aa25.83■■□□□ 1.73
RBM38-201ENST00000342690 CYP2C8P10632 490 aa25.82■■□□□ 1.72
RBM38-201ENST00000342690 PSMA5P28066 241 aa25.82■■□□□ 1.72
RBM38-201ENST00000342690 HOXA7P31268 230 aaPredicted RBP25.82■■□□□ 1.72
RBM38-201ENST00000342690 PABPC4Q13310 644 aaKnown RBP eCLIP25.82■■□□□ 1.72
RBM38-201ENST00000342690 CCDC178Q5BJE1 867 aa25.82■■□□□ 1.72
RBM38-201ENST00000342690 MB21D2Q8IYB1 491 aaPredicted RBP25.82■■□□□ 1.72
RBM38-201ENST00000342690 LPAR1Q92633 364 aa25.82■■□□□ 1.72
RBM38-201ENST00000342690 SYNPO2Q9UMS6 1093 aa25.82■■□□□ 1.72
RBM38-201ENST00000342690 ADGRA2Q96PE1 1338 aa25.82■■□□□ 1.72
RBM38-201ENST00000342690 HMGB1P09429 215 aaKnown RBP25.81■■□□□ 1.72
RBM38-201ENST00000342690 ADCK5Q3MIX3 580 aa25.81■■□□□ 1.72
RBM38-201ENST00000342690 RCSD1Q6JBY9 416 aa25.81■■□□□ 1.72
RBM38-201ENST00000342690 JAKMIP1Q96N16 626 aaKnown RBP25.81■■□□□ 1.72
RBM38-201ENST00000342690 UBAC1Q9BSL1 405 aa25.81■■□□□ 1.72
RBM38-201ENST00000342690 C22orf23Q9BZE7 217 aa25.81■■□□□ 1.72
RBM38-201ENST00000342690 ASCC2Q9H1I8 757 aaPredicted RBP25.81■■□□□ 1.72
RBM38-201ENST00000342690 RPAP3Q9H6T3 665 aaPredicted RBP25.81■■□□□ 1.72
RBM38-201ENST00000342690 PNMA3Q9UL41 463 aa25.81■■□□□ 1.72
RBM38-201ENST00000342690 F5H6K3 240 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 RAD21O60216 631 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 NDUFB10O96000 172 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 OSBPP22059 807 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 MCM5P33992 734 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 CTCFP49711 727 aaPredicted RBP25.8■■□□□ 1.72
RBM38-201ENST00000342690 KLRC3Q07444 240 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 ZSCAN10Q96SZ4 725 aaPredicted RBP25.8■■□□□ 1.72
RBM38-201ENST00000342690 TNKSO95271 1327 aa25.8■■□□□ 1.72
RBM38-201ENST00000342690 USP17L15C9J2P7 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L13C9JLJ4 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L11C9JVI0 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L18D6R9N7 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L22D6RA61 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L17D6RBQ6 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L19D6RCP7 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L20D6RJB6 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 WDR46O15213 610 aaKnown RBP25.79■■□□□ 1.72
RBM38-201ENST00000342690 ANTXR2P58335 489 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 IRX3P78415 501 aaPredicted RBP25.79■■□□□ 1.72
RBM38-201ENST00000342690 USP17L24Q0WX57 530 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 COL9A3Q14050 684 aaPredicted RBP25.79■■□□□ 1.72
RBM38-201ENST00000342690 SART3Q15020 963 aaKnown RBP25.79■■□□□ 1.72
RBM38-201ENST00000342690 CATSPERGQ6ZRH7 1159 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 GMCL1P1Q8NEA9 526 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 TMEM47Q9BQJ4 181 aa25.79■■□□□ 1.72
RBM38-201ENST00000342690 ERICH2A1L162 156 aa25.78■■□□□ 1.72
RBM38-201ENST00000342690 TLR2O60603 784 aa25.78■■□□□ 1.72
RBM38-201ENST00000342690 TOP1P11387 765 aaKnown RBP25.78■■□□□ 1.72
RBM38-201ENST00000342690 BLOC1S2Q6QNY1 142 aa25.78■■□□□ 1.72
RBM38-201ENST00000342690 DGKHQ86XP1 1220 aa25.78■■□□□ 1.72
RBM38-201ENST00000342690 ENAHQ8N8S7 591 aaPredicted RBP25.78■■□□□ 1.72
RBM38-201ENST00000342690 TTC14Q96N46 770 aa25.78■■□□□ 1.72
RBM38-201ENST00000342690 PRC1O43663 620 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 CASTP20810 708 aaKnown RBP25.77■■□□□ 1.72
RBM38-201ENST00000342690 LBX1P52954 281 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 FAM83BQ5T0W9 1011 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 SLFN13Q68D06 897 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 CHST3Q7LGC8 479 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 NUP88Q99567 741 aaPredicted RBP25.77■■□□□ 1.72
RBM38-201ENST00000342690 P2RX7Q99572 595 aaKnown RBP25.77■■□□□ 1.72
RBM38-201ENST00000342690 TANGO6Q9C0B7 1094 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 PARP14Q460N5 1801 aa25.77■■□□□ 1.72
RBM38-201ENST00000342690 GPR25O00155 361 aa25.76■■□□□ 1.71
RBM38-201ENST00000342690 RBM25P49756 843 aaKnown RBP25.76■■□□□ 1.71
RBM38-201ENST00000342690 SEC23AQ15436 765 aa25.76■■□□□ 1.71
RBM38-201ENST00000342690 DHX32Q7L7V1 743 aaKnown RBP25.76■■□□□ 1.71
RBM38-201ENST00000342690 SMCR8Q8TEV9 937 aaPredicted RBP25.76■■□□□ 1.71
RBM38-201ENST00000342690 ANKS1AQ92625 1134 aa25.76■■□□□ 1.71
RBM38-201ENST00000342690 MTA3Q9BTC8 594 aa25.76■■□□□ 1.71
RBM38-201ENST00000342690 TM6SF1Q9BZW5 370 aa25.76■■□□□ 1.71
RBM38-201ENST00000342690 CPA4Q9UI42 421 aa25.76■■□□□ 1.71
RBM38-201ENST00000342690 WDR19Q8NEZ3 1342 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms