RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TMX2Q9Y320 296 aa19.08■□□□□ 0.64
SNED1-202ENST00000342631 ITGBL1O95965 494 aaPredicted RBP19.07■□□□□ 0.64
SNED1-202ENST00000342631 GNAQP50148 359 aa19.07■□□□□ 0.64
SNED1-202ENST00000342631 TTLL12Q14166 644 aaPredicted RBP19.07■□□□□ 0.64
SNED1-202ENST00000342631 RTN1Q16799 776 aa19.07■□□□□ 0.64
SNED1-202ENST00000342631 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.07■□□□□ 0.64
SNED1-202ENST00000342631 CCDC83Q8IWF9 413 aa19.07■□□□□ 0.64
SNED1-202ENST00000342631 NECAB1Q8N987 351 aa19.07■□□□□ 0.64
SNED1-202ENST00000342631 ZKSCAN4Q969J2 545 aaPredicted RBP19.07■□□□□ 0.64
SNED1-202ENST00000342631 WDR18Q9BV38 432 aa19.07■□□□□ 0.64
SNED1-202ENST00000342631 TRAF5O00463 557 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 CDKL5O76039 1030 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 PTPRAP18433 802 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 CCT2P78371 535 aaKnown RBP19.06■□□□□ 0.64
SNED1-202ENST00000342631 PRKG1Q13976 671 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 CLEC10AQ8IUN9 316 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 MYL10Q9BUA6 226 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 OTOFQ9HC10 1997 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 KIF3CO14782 793 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 CPLX1O14810 134 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 SNHG28P0DPA3 235 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 GRM4Q14833 912 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 LRRC47Q8N1G4 583 aaKnown RBP19.06■□□□□ 0.64
SNED1-202ENST00000342631 LZTS2Q9BRK4 669 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 GOPCQ9HD26 462 aa19.06■□□□□ 0.64
SNED1-202ENST00000342631 TRPM7Q96QT4 1865 aa19.05■□□□□ 0.64
SNED1-202ENST00000342631 ST3GAL1Q11201 340 aa19.05■□□□□ 0.64
SNED1-202ENST00000342631 VGLL4Q14135 290 aa19.05■□□□□ 0.64
SNED1-202ENST00000342631 DCAF4Q8WV16 495 aa19.05■□□□□ 0.64
SNED1-202ENST00000342631 CWC22Q9HCG8 908 aaKnown RBP19.05■□□□□ 0.64
SNED1-202ENST00000342631 PARP1P09874 1014 aaKnown RBP19.04■□□□□ 0.64
SNED1-202ENST00000342631 PDHBP11177 359 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 ASPRV1Q53RT3 343 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 GPATCH4Q5T3I0 446 aaKnown RBP19.04■□□□□ 0.64
SNED1-202ENST00000342631 LDLRAD1Q5T700 205 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 C2orf69Q8N8R5 385 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 SMC1BQ8NDV3 1235 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 GMCL1Q96IK5 515 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 KIAA1683Q9H0B3 1180 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 GBA2Q9HCG7 927 aaPredicted RBP19.04■□□□□ 0.64
SNED1-202ENST00000342631 FAM217BQ9NTX9 383 aaPredicted RBP19.04■□□□□ 0.64
SNED1-202ENST00000342631 FZD1Q9UP38 647 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 SNCAIPQ9Y6H5 919 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 A0A1W2PRG0 241 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 F5H6K3 240 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 RXRAP19793 462 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 USP14P54578 494 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 HMGN5P82970 282 aaKnown RBP19.04■□□□□ 0.64
SNED1-202ENST00000342631 KLRC3Q07444 240 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 ZNF280CQ8ND82 737 aa19.04■□□□□ 0.64
SNED1-202ENST00000342631 NCOA5Q9HCD5 579 aaKnown RBP19.04■□□□□ 0.64
SNED1-202ENST00000342631 PALM3A6NDB9 673 aaPredicted RBP19.03■□□□□ 0.64
SNED1-202ENST00000342631 USP17L10C9JJH3 530 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 CELF2O95319 508 aaKnown RBP19.03■□□□□ 0.64
SNED1-202ENST00000342631 IFNAR1P17181 557 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 YY1P25490 414 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 SMARCA1P28370 1054 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 CDC27P30260 824 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 ADD1P35611 737 aaKnown RBP19.03■□□□□ 0.64
SNED1-202ENST00000342631 SLC4A3P48751 1232 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 RAB11FIP4Q86YS3 637 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 RBM46Q8TBY0 533 aaKnown RBP19.03■□□□□ 0.64
SNED1-202ENST00000342631 ACER1Q8TDN7 264 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 ZNF408Q9H9D4 720 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 MAD2L2Q9UI95 211 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 SMC3Q9UQE7 1217 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 ZHX2Q9Y6X8 837 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 PHIPQ8WWQ0 1821 aa19.03■□□□□ 0.64
SNED1-202ENST00000342631 C19orf81C9J6K1 198 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 TOMM70O94826 608 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 ECE1P42892 770 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 PPATQ06203 517 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 NTRK3Q16288 839 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 SLFN13Q68D06 897 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 ERO1BQ86YB8 467 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 CCDC144CPQ8IYA2 1237 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 SMARCC2Q8TAQ2 1214 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 LPAR1Q92633 364 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 FEZ1Q99689 392 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 KIF3AQ9Y496 699 aa19.02■□□□□ 0.64
SNED1-202ENST00000342631 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.63
SNED1-202ENST00000342631 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.63
SNED1-202ENST00000342631 PDIA4P13667 645 aaKnown RBP19.01■□□□□ 0.63
SNED1-202ENST00000342631 SLC1A4P43007 532 aa19.01■□□□□ 0.63
SNED1-202ENST00000342631 BACE1P56817 501 aa19.01■□□□□ 0.63
SNED1-202ENST00000342631 ZNF543Q08ER8 600 aa19.01■□□□□ 0.63
SNED1-202ENST00000342631 RBM27Q9P2N5 1060 aaKnown RBP19.01■□□□□ 0.63
SNED1-202ENST00000342631 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.01■□□□□ 0.63
SNED1-202ENST00000342631 AFG3L2Q9Y4W6 797 aa19.01■□□□□ 0.63
SNED1-202ENST00000342631 PASKQ96RG2 1323 aa19.01■□□□□ 0.63
SNED1-202ENST00000342631 SPDYE5A6NIY4 337 aa19■□□□□ 0.63
SNED1-202ENST00000342631 CTDNEP1O95476 244 aa19■□□□□ 0.63
SNED1-202ENST00000342631 NDUFB10O96000 172 aa19■□□□□ 0.63
SNED1-202ENST00000342631 STK36Q9NRP7 1315 aa19■□□□□ 0.63
SNED1-202ENST00000342631 PTPDC1A2A3K4 754 aa19■□□□□ 0.63
SNED1-202ENST00000342631 UBE2Q2LH0YL09 131 aa19■□□□□ 0.63
SNED1-202ENST00000342631 SPP2Q13103 211 aa19■□□□□ 0.63
SNED1-202ENST00000342631 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
SNED1-202ENST00000342631 MOB2Q70IA6 237 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms