RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 MCM7P33993 719 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 AS3MTQ9HBK9 375 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 SENP2Q9HC62 589 aa13.43□□□□□ -0.26
C2orf88-201ENST00000340623 SMIM22K7EJ46 135 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
C2orf88-201ENST00000340623 ANTXR2P58335 489 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
C2orf88-201ENST00000340623 ASNSP08243 561 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 LETM2Q2VYF4 491 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
C2orf88-201ENST00000340623 ZNF341Q9BYN7 854 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 MTMR6Q9Y217 621 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 ENTPD3O75355 529 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 FLOT1O75955 427 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 ZNF174Q15697 407 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 NEDD1Q8NHV4 660 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 CHURC1Q8WUH1 139 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 TRIM5Q9C035 493 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
C2orf88-201ENST00000340623 BRD1O95696 1058 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 SCG2P13521 617 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
C2orf88-201ENST00000340623 GADL1Q6ZQY3 521 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
C2orf88-201ENST00000340623 FAM151AQ8WW52 585 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 DEFB129Q9H1M3 183 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 EHMT1Q9H9B1 1298 aa13.42□□□□□ -0.26
C2orf88-201ENST00000340623 VIRMAQ69YN4 1812 aaKnown RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 GOLGA6L6A8MZA4 724 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 SPTLC2O15270 562 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 RASA1P20936 1047 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 NSMFQ6X4W1 530 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 UIMC1Q96RL1 719 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 HACL1Q9UJ83 578 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 CFBP00751 764 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 USP17L5A8MUK1 530 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 IFNAR1P17181 557 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 GAS2L3Q86XJ1 694 aa13.41□□□□□ -0.26
C2orf88-201ENST00000340623 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
C2orf88-201ENST00000340623 IQCA1LA6NCM1 817 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
C2orf88-201ENST00000340623 BMP3P12645 472 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 UBA7P41226 1012 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 UBE2HP62256 183 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 CCDC173Q0VFZ6 552 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
C2orf88-201ENST00000340623 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
C2orf88-201ENST00000340623 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
C2orf88-201ENST00000340623 TJP1Q07157 1748 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.4□□□□□ -0.26
C2orf88-201ENST00000340623 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 CDC27P30260 824 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 CEP57L1Q8IYX8 460 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 KCNG4Q8TDN1 519 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 PIGSQ96S52 555 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 ASPRV1Q53RT3 343 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
C2orf88-201ENST00000340623 ADCY7P51828 1080 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 SNAP25P60880 206 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
C2orf88-201ENST00000340623 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 TCP11L1Q9NUJ3 509 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 WNT10BO00744 389 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 ZBED4O75132 1171 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 EPS15P42566 896 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 SPP2Q13103 211 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
C2orf88-201ENST00000340623 GADD45BO75293 160 aaPredicted RBP13.39□□□□□ -0.27
C2orf88-201ENST00000340623 ALAS1P13196 640 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
C2orf88-201ENST00000340623 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
C2orf88-201ENST00000340623 UBR2Q8IWV8 1755 aa13.38□□□□□ -0.27
C2orf88-201ENST00000340623 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
C2orf88-201ENST00000340623 SLURP2P0DP57 97 aa13.38□□□□□ -0.27
C2orf88-201ENST00000340623 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
C2orf88-201ENST00000340623 SMCR8Q8TEV9 937 aaPredicted RBP13.38□□□□□ -0.27
C2orf88-201ENST00000340623 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
C2orf88-201ENST00000340623 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
C2orf88-201ENST00000340623 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
C2orf88-201ENST00000340623 RHBDL3P58872 404 aa13.38□□□□□ -0.27
C2orf88-201ENST00000340623 RILPL1Q5EBL4 403 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms