RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 CCDC169A6NNP5 214 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 H7C1D1 291 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 INF2Q27J81 1249 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 WDR44Q5JSH3 913 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 BLIDQ8IZY5 108 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 MSANTD4Q8NCY6 345 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 TRIM58Q8NG06 486 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 TGFBRAP1Q8WUH2 860 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 IQCDQ96DY2 449 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 ZSCAN10Q96SZ4 725 aaPredicted RBP15.27■□□□□ 0.04
RTN4-202ENST00000337526 HAUS4Q9H6D7 363 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 STIM2Q9P246 746 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.03
RTN4-202ENST00000337526 ATP5DP30049 168 aa15.27■□□□□ 0.03
RTN4-202ENST00000337526 DPCR1Q3MIW9 517 aa15.27■□□□□ 0.03
RTN4-202ENST00000337526 ZMYM1Q5SVZ6 1142 aa15.27■□□□□ 0.03
RTN4-202ENST00000337526 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.03
RTN4-202ENST00000337526 SMTNP53814 917 aa15.27■□□□□ 0.03
RTN4-202ENST00000337526 RPS8P62241 208 aaKnown RBP15.27■□□□□ 0.03
RTN4-202ENST00000337526 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.27■□□□□ 0.03
RTN4-202ENST00000337526 CDCA7Q9BWT1 371 aaPredicted RBP15.27■□□□□ 0.03
RTN4-202ENST00000337526 CSRNP2Q9H175 543 aa15.27■□□□□ 0.03
RTN4-202ENST00000337526 MKRN1Q9UHC7 482 aaKnown RBP15.27■□□□□ 0.03
RTN4-202ENST00000337526 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 RBM17Q96I25 401 aaKnown RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 TXNDC16Q9P2K2 825 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 SWAP70Q9UH65 585 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 CFAP74Q9C0B2 1584 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 EXOC3O60645 756 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 TSPOAP1O95153 1857 aa15.26■□□□□ 0.03
RTN4-202ENST00000337526 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 ERCC5P28715 1186 aaPredicted RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 ARPP21Q9UBL0 812 aaPredicted RBP15.26■□□□□ 0.03
RTN4-202ENST00000337526 UBE3CQ15386 1083 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 PTGDRQ13258 359 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 PUS3Q9BZE2 481 aaKnown RBP15.25■□□□□ 0.03
RTN4-202ENST00000337526 SH2D4AQ9H788 454 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 A0A087WWV3 80 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 BCAMP50895 628 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 FTOQ9C0B1 505 aaKnown RBP eCLIP15.25■□□□□ 0.032e-14■□□□□ 10
RTN4-202ENST00000337526 PLEKHA4Q9H4M7 779 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 ASIC3Q9UHC3 531 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
RTN4-202ENST00000337526 KRT71Q3SY84 523 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 C11orf57Q6ZUT1 292 aaPredicted RBP15.25■□□□□ 0.03
RTN4-202ENST00000337526 MYCT1Q8N699 235 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 IFT74Q96LB3 600 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 NT5C3AQ9H0P0 336 aa15.25■□□□□ 0.03
RTN4-202ENST00000337526 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
RTN4-202ENST00000337526 B4DLN1 442 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 GTPBP6O43824 516 aaPredicted RBP15.24■□□□□ 0.03
RTN4-202ENST00000337526 GCNT3O95395 438 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
RTN4-202ENST00000337526 GYG1P46976 350 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 PNMA1Q8ND90 353 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 PDE8BO95263 885 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 SCG2P13521 617 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 CROCCP2Q86T23 111 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 SYCE1Q8N0S2 351 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 EEF2KMTQ96G04 330 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 PSMD1Q99460 953 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 MRPL44Q9H9J2 332 aaKnown RBP15.24■□□□□ 0.03
RTN4-202ENST00000337526 BIN2Q9UBW5 565 aaPredicted RBP15.24■□□□□ 0.03
RTN4-202ENST00000337526 PARP3Q9Y6F1 533 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 LARGE1O95461 756 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 ARHGAP25P42331 645 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 RSRC1Q96IZ7 334 aaKnown RBP15.24■□□□□ 0.03
RTN4-202ENST00000337526 GPR108Q9NPR9 543 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 PCDHB13Q9Y5F0 798 aa15.24■□□□□ 0.03
RTN4-202ENST00000337526 SYNMO15061 1565 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 CARMIL3Q8ND23 1372 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 ADORA1P30542 326 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 TECP42680 631 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 PHKA1P46020 1223 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 LINC00301Q8NCQ3 95 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 TRIM7Q9C029 511 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 CDC25BP30305 580 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 UAP1Q16222 522 aaPredicted RBP15.23■□□□□ 0.03
RTN4-202ENST00000337526 MYOCDQ8IZQ8 938 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 PPP1R13BQ96KQ4 1090 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 IKBKBO14920 756 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
RTN4-202ENST00000337526 GSDMAQ96QA5 445 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 PPP6R2O75170 966 aa15.23■□□□□ 0.03
RTN4-202ENST00000337526 CCDC105Q8IYK2 499 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms