RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CRACR2AQ9BSW2 395 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 IRX2Q9BZI1 471 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 QTRT2Q9H974 415 aaKnown RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 C6orf50Q9HD87 102 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 RCOR1Q9UKL0 485 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 GUCA1BQ9UMX6 200 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 PPP2R2CQ9Y2T4 447 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 BAZ2BQ9UIF8 2168 aaKnown RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CYP19A1P11511 503 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 ARID4AP29374 1257 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 NOP2P46087 812 aaKnown RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 NLRP12P59046 1061 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 ADALQ6DHV7 355 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 NOSTRINQ8IVI9 506 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CDCA7Q9BWT1 371 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.29□□□□□ -1.246e-20■■■■■ 109
HMG20A-201ENST00000336216 PCDHA5Q9Y5H7 936 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 ZNF804BA4D1E1 1349 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 GNAQP50148 359 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 TBC1D10CQ8IV04 446 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 SPICE1Q8N0Z3 855 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 SLC44A5Q8NCS7 719 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 DPF2Q92785 391 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 PSMB7Q99436 277 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 PARD6BQ9BYG5 372 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 IMPACTQ9P2X3 320 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CTNND2Q9UQB3 1225 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CPDO75976 1380 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 MACROD2A1Z1Q3 448 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 USP17L3A6NCW0 530 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 USP17L4A6NCW7 530 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 PSMA7O14818 248 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CCDC175P0C221 793 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CALML3P27482 149 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CDC25BP30305 580 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 UBE3CQ15386 1083 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 USP17L1Q7RTZ2 530 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CCDC148Q8NFR7 591 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 SMARCC2Q8TAQ2 1214 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 WDR66Q8TBY9 1149 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 ZSCAN10Q96SZ4 725 aaPredicted RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 FAM107BQ9H098 131 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 DBNDD1Q9H9R9 158 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 HOMER2Q9NSB8 354 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 GJA3Q9Y6H8 435 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 RNASE9P60153 205 aaKnown RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 PTGDRQ13258 359 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 PRPF4BQ13523 1007 aaKnown RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 PAXIP1Q6ZW49 1069 aaPredicted RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 SYCP3Q8IZU3 236 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 STRBPQ96SI9 672 aaKnown RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 EYA3Q99504 573 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 USP40Q9NVE5 1235 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 TAB2Q9NYJ8 693 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CTAGE15A4D2H0 777 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 FAM196BA6NMK8 535 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 TMCO5BA8MYB1 307 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CTAGE8P0CG41 777 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 SLC1A4P43007 532 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 MNAT1P51948 309 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 SETQ01105 290 aaPredicted RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 AMPD3Q01432 767 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 KRT79Q5XKE5 535 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CYB5R4Q7L1T6 521 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CTAGE6Q86UF2 777 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CTAGE4Q8IX94 777 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 RBM17Q96I25 401 aaKnown RBP7.28□□□□□ -1.24
HMG20A-201ENST00000336216 CARMIL3Q8ND23 1372 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 RTL9Q8NET4 1388 aa7.28□□□□□ -1.24
HMG20A-201ENST00000336216 KLRF2D3W0D1 207 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 MYO1CO00159 1063 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 ARHGAP6O43182 974 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 CIAO1O76071 339 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 SLC16A2P36021 539 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 POSTNQ15063 836 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 LONRF2Q1L5Z9 754 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 CTR9Q6PD62 1173 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 NYAP1Q6ZVC0 841 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 WDR24Q96S15 920 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 ZNF446Q9NWS9 450 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 PSDA5PKW4 1024 aaPredicted RBP7.27□□□□□ -1.25
HMG20A-201ENST00000336216 SPDYE3A6NKU9 549 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 EFCAB8A8MWE9 144 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 UBE2Q2LH0YL09 131 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 DDX39AO00148 427 aaKnown RBP7.27□□□□□ -1.25
HMG20A-201ENST00000336216 ZMYND10O75800 440 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 GNA11P29992 359 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 BTDP43251 543 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 PLA2G4AP47712 749 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 PDE4DQ08499 809 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 E2F4Q16254 413 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 TTC31Q49AM3 519 aaPredicted RBP7.27□□□□□ -1.25
HMG20A-201ENST00000336216 TBC1D9BQ66K14 1250 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 SARM1Q6SZW1 724 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 SPAG5Q96R06 1193 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 TSG101Q99816 390 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 SENP2Q9HC62 589 aa7.27□□□□□ -1.25
HMG20A-201ENST00000336216 ADAM21Q9UKJ8 722 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms