RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 PFKFB3Q16875 520 aaPredicted RBP18.24■□□□□ 0.51
PGBD2-201ENST00000329291 CC2D2BQ6DHV5 1058 aa18.24■□□□□ 0.51
PGBD2-201ENST00000329291 KRI1Q8N9T8 703 aaKnown RBP18.24■□□□□ 0.51
PGBD2-201ENST00000329291 ZNF830Q96NB3 372 aaPredicted RBP18.24■□□□□ 0.51
PGBD2-201ENST00000329291 PCDHAC2Q9Y5I4 1007 aa18.24■□□□□ 0.51
PGBD2-201ENST00000329291 SLX4Q8IY92 1834 aa18.24■□□□□ 0.51
PGBD2-201ENST00000329291 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
PGBD2-201ENST00000329291 PTPREP23469 700 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 KIF5BP33176 963 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 APOBEC3HQ6NTF7 200 aaKnown RBP18.23■□□□□ 0.51
PGBD2-201ENST00000329291 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 USP40Q9NVE5 1235 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 CYTH3O43739 400 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
PGBD2-201ENST00000329291 GOLGA8HP0CJ92 632 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 LONRF3Q496Y0 759 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 CPVLQ9H3G5 476 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 C10orf71Q711Q0 1435 aa18.23■□□□□ 0.51
PGBD2-201ENST00000329291 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 CDC42EP5Q6NZY7 148 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 GPKOWQ92917 476 aaPredicted RBP eCLIP18.22■□□□□ 0.51
PGBD2-201ENST00000329291 ZNF287Q9HBT7 754 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 ZKSCAN5Q9Y2L8 839 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 BIN1O00499 593 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 DHX40Q8IX18 779 aaKnown RBP18.22■□□□□ 0.51
PGBD2-201ENST00000329291 SUPT20HQ8NEM7 779 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 CEP95Q96GE4 821 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 KCNH3Q9ULD8 1083 aa18.22■□□□□ 0.51
PGBD2-201ENST00000329291 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
PGBD2-201ENST00000329291 GABPAQ06546 454 aa18.21■□□□□ 0.51
PGBD2-201ENST00000329291 DPCR1Q3MIW9 517 aa18.21■□□□□ 0.51
PGBD2-201ENST00000329291 USP49Q70CQ1 688 aa18.21■□□□□ 0.51
PGBD2-201ENST00000329291 ZFPM1Q8IX07 1006 aa18.21■□□□□ 0.51
PGBD2-201ENST00000329291 TIGD1Q96MW7 591 aa18.21■□□□□ 0.51
PGBD2-201ENST00000329291 ANO10Q9NW15 660 aa18.21■□□□□ 0.51
PGBD2-201ENST00000329291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
PGBD2-201ENST00000329291 NLRP5P59047 1200 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 NFIAQ12857 509 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 SRPRBQ9Y5M8 271 aaKnown RBP18.2■□□□□ 0.5
PGBD2-201ENST00000329291 ADAMTSL1Q8N6G6 1762 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 TRIM75PA6NK02 468 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 ECE2O60344 883 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 CAVIN2O95810 425 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 ZNF174Q15697 407 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 ISM2Q6H9L7 571 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 HHIPL2Q6UWX4 724 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
PGBD2-201ENST00000329291 SPC24Q8NBT2 197 aa18.2■□□□□ 0.5
PGBD2-201ENST00000329291 MYH1P12882 1939 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 FOXN1O15353 648 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 FKBP1AP62942 108 aaKnown RBP18.19■□□□□ 0.5
PGBD2-201ENST00000329291 PNOCQ13519 176 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 GRIPAP1Q4V328 841 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 STRIP1Q5VSL9 837 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 USP17L2Q6R6M4 530 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 METTL16Q86W50 562 aaKnown RBP18.19■□□□□ 0.5
PGBD2-201ENST00000329291 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 TTLL6Q8N841 843 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 TEKT1Q969V4 418 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 CSRNP2Q9H175 543 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 AKR1B1P15121 316 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 MSNP26038 577 aaKnown RBP18.19■□□□□ 0.5
PGBD2-201ENST00000329291 CRKP46108 304 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 NOVP48745 357 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
PGBD2-201ENST00000329291 TTC12Q9H892 705 aaPredicted RBP18.19■□□□□ 0.5
PGBD2-201ENST00000329291 KLRF2D3W0D1 207 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 C21orf2O43822 256 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 CACNB3P54284 484 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 MDM2Q00987 491 aaPredicted RBP18.18■□□□□ 0.5
PGBD2-201ENST00000329291 AOC3Q16853 763 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 KRBA2Q6ZNG9 492 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 PIK3AP1Q6ZUJ8 805 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
PGBD2-201ENST00000329291 ZNF75DP51815 510 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 WWC2Q6AWC2 1192 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 RASGRP4Q8TDF6 673 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
PGBD2-201ENST00000329291 BRMS1Q9HCU9 246 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 TUBE1Q9UJT0 475 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 TOP1P11387 765 aaKnown RBP18.17■□□□□ 0.5
PGBD2-201ENST00000329291 GNAQP50148 359 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 NLRP12P59046 1061 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 ZNF579Q8NAF0 562 aaKnown RBP18.17■□□□□ 0.5
PGBD2-201ENST00000329291 TRIM5Q9C035 493 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 CEP131Q9UPN4 1083 aa18.17■□□□□ 0.5
PGBD2-201ENST00000329291 FOCADQ5VW36 1801 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 POLR2DO15514 142 aaKnown RBP18.16■□□□□ 0.5
PGBD2-201ENST00000329291 SHMT1P34896 483 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
PGBD2-201ENST00000329291 CCDC93Q567U6 631 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 TTC38Q5R3I4 469 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms