RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	CACTIN	Q8WUQ7	758 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	SYNRG	Q9UMZ2	1314 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	DYNC1I1	O14576	645 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	UBXN2A	P68543	259 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	SPAG1	Q07617	926 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	NCAPH2	Q6IBW4	605 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	SV2B	Q7L1I2	683 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	KIFC2	Q96AC6	838 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	CDHR2	Q9BYE9	1310 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	PPEF1	O14829	653 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	FMNL1	O95466	1100 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	ALDH1B1	P30837	517 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	ADCY7	P51828	1080 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	NLGN1	Q8N2Q7	840 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	ENAH	Q8N8S7	591 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	PYM1	Q9BRP8	204 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	LUC7L2	Q9Y383	392 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	FAM205C	A6NFA0	338 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	FGFR1OP	O95684	399 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	GRAP	Q13588	217 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	CABP7	Q86V35	215 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	CLEC10A	Q8IUN9	316 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	GRAPL	Q8TC17	118 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	LEMD3	Q9Y2U8	911 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	THRAP3	Q9Y2W1	955 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	USP42	Q9H9J4	1324 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	MACROD2	A1Z1Q3	448 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	SORBS3	O60504	671 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	KRT9	P35527	623 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	PTF1A	Q7RTS3	328 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	MLKL	Q8NB16	471 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	ERMN	Q8TAM6	284 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	TAF4B	Q92750	862 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	CTAGE1	Q96RT6	745 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	PIGS	Q96S52	555 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	PSMB7	Q99436	277 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	LY9	Q9HBG7	655 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	BCS1L	Q9Y276	419 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	SPATA31A1	Q5TZJ5	1347 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	MMP1	P03956	469 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	CCDC175	P0C221	793 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	DLGAP5	Q15398	846 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	CALCRL	Q16602	461 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	NSMF	Q6X4W1	530 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	SRRT	Q9BXP5	876 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	POLR3E	Q9NVU0	708 aa		13.31	□□□□□ -0.28
DDR1-223	ENST00000324771	LIFR	P42702	1097 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	EXOSC10	Q01780	885 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	MCM6	Q14566	821 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	PAXBP1	Q9Y5B6	917 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	UTY	O14607	1347 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	ITSN1	Q15811	1721 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	KDM4F	A0A1W2PPD8	638 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	FOXN1	O15353	648 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	USO1	O60763	962 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	ANTXR2	P58335	489 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	CYP4A11	Q02928	519 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	NELFB	Q8WX92	580 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	SLC4A9	Q96Q91	983 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	NOC4L	Q9BVI4	516 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	MXD3	Q9BW11	206 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	POLD4	Q9HCU8	107 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	MST1R	Q04912	1400 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	HMGB2	P26583	209 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	RNASE9	P60153	205 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	PAK1	Q13153	545 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	CCDC42	Q96M95	316 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	TRERF1	Q96PN7	1200 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	ACBD3	Q9H3P7	528 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	CD209	Q9NNX6	404 aa		13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	SCAF8	Q9UPN6	1271 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
DDR1-223	ENST00000324771	RHOXF2B	P0C7M4	288 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	CACNB1	Q02641	598 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	CERKL	Q49MI3	558 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	GJD4	Q96KN9	370 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	RHOXF2	Q9BQY4	288 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	RNF26	Q9BY78	433 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	ERLIN1	O75477	346 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	GRM1	Q13255	1194 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	PPP2R5B	Q15173	497 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	MIGA2	Q7L4E1	593 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	FERMT2	Q96AC1	680 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	SCLT1	Q96NL6	688 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	SLU7	O95391	586 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	MYCL	P12524	364 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	PDE6B	P35913	854 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	PLCD1	P51178	756 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	PPARD	Q03181	441 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	INTS5	Q6P9B9	1019 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	FAM114A1	Q8IWE2	563 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	SLF1	Q9BQI6	1058 aa		13.29	□□□□□ -0.28
DDR1-223	ENST00000324771	SLC39A2	Q9NP94	309 aa		13.29	□□□□□ -0.28

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