RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PPP1R12CQ9BZL4 782 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 PORCNQ9H237 461 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 SLC5A4Q9NY91 659 aa8.47□□□□□ -1.05
CSTF3-201ENST00000323959 ATP5J2-PTCD1G3V325 749 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 ARVCFO00192 962 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 ZIC2O95409 532 aaPredicted RBP8.46□□□□□ -1.05
CSTF3-201ENST00000323959 CD4P01730 458 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 MYCNP04198 464 aaPredicted RBP8.46□□□□□ -1.05
CSTF3-201ENST00000323959 CYP2C18P33260 490 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 RFC2P35250 354 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 ZNF280CQ8ND82 737 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 NPLOC4Q8TAT6 608 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 TXNRD2Q9NNW7 524 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 BABAM1Q9NWV8 329 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 CDV3Q9UKY7 258 aaKnown RBP8.46□□□□□ -1.05
CSTF3-201ENST00000323959 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.05
CSTF3-201ENST00000323959 PRKAR2BP31323 418 aa8.46□□□□□ -1.06
CSTF3-201ENST00000323959 APOBEC3HQ6NTF7 200 aaKnown RBP8.46□□□□□ -1.06
CSTF3-201ENST00000323959 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.06
CSTF3-201ENST00000323959 AS3MTQ9HBK9 375 aa8.46□□□□□ -1.06
CSTF3-201ENST00000323959 RABGAP1Q9Y3P9 1069 aa8.46□□□□□ -1.06
CSTF3-201ENST00000323959 ATAD5Q96QE3 1844 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 CDK5RAP2Q96SN8 1893 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 CLCN5P51795 746 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 ASTLQ6HA08 431 aaPredicted RBP8.45□□□□□ -1.06
CSTF3-201ENST00000323959 TMEM105Q8N8V8 129 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
CSTF3-201ENST00000323959 MIS18AQ9NYP9 233 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
CSTF3-201ENST00000323959 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 CST5P28325 142 aaPredicted RBP8.45□□□□□ -1.06
CSTF3-201ENST00000323959 ICAM3P32942 547 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 PTPN21Q16825 1174 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 PANK3Q9H999 370 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 BRWD1Q9NSI6 2320 aa8.45□□□□□ -1.06
CSTF3-201ENST00000323959 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
CSTF3-201ENST00000323959 RTL5Q5HYW3 569 aaPredicted RBP8.44□□□□□ -1.06
CSTF3-201ENST00000323959 KLHDC9Q8NEP7 349 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 SAMD11Q96NU1 681 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 OSBPL5Q9H0X9 879 aaPredicted RBP8.44□□□□□ -1.06
CSTF3-201ENST00000323959 HIPK3Q9H422 1215 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 ZBED9Q6R2W3 1325 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 ADAMTS4O75173 837 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 BAIAP3O94812 1187 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 CHRNDQ07001 517 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 RPAINQ86UA6 219 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 TTLL11Q8NHH1 800 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 GLT1D1Q96MS3 346 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 SUGCTQ9HAC7 445 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 TMOD4Q9NZQ9 345 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 ANXA1P04083 346 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 EIF2S2P20042 333 aaKnown RBP8.44□□□□□ -1.06
CSTF3-201ENST00000323959 PMLP29590 882 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 ANO1Q5XXA6 986 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 NSUN3Q9H649 340 aaKnown RBP8.44□□□□□ -1.06
CSTF3-201ENST00000323959 PCDHGC5Q9Y5F6 944 aa8.44□□□□□ -1.06
CSTF3-201ENST00000323959 HMGCS2P54868 508 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 DCTN1Q14203 1278 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 ZC3H14Q6PJT7 736 aaKnown RBP8.43□□□□□ -1.06
CSTF3-201ENST00000323959 UBALD2Q8IYN6 164 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 WDR18Q9BV38 432 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 NOC4LQ9BVI4 516 aaKnown RBP8.43□□□□□ -1.06
CSTF3-201ENST00000323959 GREM2Q9H772 168 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 CWC25Q9NXE8 425 aaPredicted RBP8.43□□□□□ -1.06
CSTF3-201ENST00000323959 CD207Q9UJ71 328 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 STRNO43815 780 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 ENTPD3O75355 529 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 Q3C1V9 767 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 PCSK9Q8NBP7 692 aaKnown RBP8.43□□□□□ -1.06
CSTF3-201ENST00000323959 CCDC85AQ96PX6 553 aaPredicted RBP8.43□□□□□ -1.06
CSTF3-201ENST00000323959 MPHOSPH8Q99549 860 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 HINFPQ9BQA5 517 aa8.43□□□□□ -1.06
CSTF3-201ENST00000323959 DCHS1Q96JQ0 3298 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 REV3LO60673 3130 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 TBC1D12O60347 775 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 SPP2Q13103 211 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 CTC1Q2NKJ3 1217 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 CCSAPQ6IQ19 270 aaPredicted RBP8.42□□□□□ -1.06
CSTF3-201ENST00000323959 CCDC105Q8IYK2 499 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 TMEFF1Q8IYR6 380 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 CYP2W1Q8TAV3 490 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 CYSRT1A8MQ03 144 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 BANK1Q8NDB2 785 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 KNSTRNQ9Y448 316 aa8.42□□□□□ -1.06
CSTF3-201ENST00000323959 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 C19orf81C9J6K1 198 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 TTLL4Q14679 1199 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 SLC43A3Q8NBI5 491 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 AKR1A1P14550 325 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 LBX2Q6XYB7 198 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 DPP9Q86TI2 863 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 ABRAQ8N0Z2 381 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 FBXO22Q8NEZ5 403 aa8.41□□□□□ -1.06
CSTF3-201ENST00000323959 CNMDO75829 334 aa8.4□□□□□ -1.06
CSTF3-201ENST00000323959 EYA4O95677 639 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms