RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 MAEAQ7L5Y9 396 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 CIAO1O76071 339 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 BCRP11274 1271 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 ZCCHC11Q5TAX3 1644 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 ADCY10Q96PN6 1610 aa12.11□□□□□ -0.47
SNRNP200-201ENST00000323853 POLD1P28340 1107 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 RPS6KA1Q15418 735 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 PDE6AP16499 860 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 TRPC3Q13507 836 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 GPIHBP1Q8IV16 184 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 MRFAP1L1Q96HT8 127 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 TAOK1Q7L7X3 1001 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 CCDC84Q86UT8 332 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 FANCBQ8NB91 859 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 MAP4K1Q92918 833 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 PLEKHG1Q9ULL1 1385 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 ZNF365Q70YC5 407 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 CIB2O75838 187 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 ARL1P40616 181 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 ZYXQ15942 572 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 DAAM2Q86T65 1068 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 TTC16Q8NEE8 873 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 CFAP65Q6ZU64 1925 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 ERCC3P19447 782 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 RAD51AP2Q09MP3 1159 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 INF2Q27J81 1249 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 TRIM31Q9BZY9 425 aa12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-201ENST00000323853 NDUFAB1O14561 156 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 ATP11AP98196 1134 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 BRD3Q15059 726 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 TLR7Q9NYK1 1049 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 CDK12Q9NYV4 1490 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 EXOC3O60645 756 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 ZBED4O75132 1171 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 FGAP02671 866 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 SAR1BQ9Y6B6 198 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 TET3O43151 1660 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 E7EVH7 732 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 TECP42680 631 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 PSMB7Q99436 277 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 TNKSO95271 1327 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 BCAMP50895 628 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 MAP7D1Q3KQU3 841 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
SNRNP200-201ENST00000323853 CA8P35219 290 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 GALNT17Q6IS24 598 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 GPBP1Q86WP2 473 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 SUPT20HQ8NEM7 779 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 GPR108Q9NPR9 543 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 METP08581 1390 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 CARMIL3Q8ND23 1372 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 NDC80O14777 642 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 GAS8O95995 478 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 SND1Q7KZF4 910 aaKnown RBP eCLIP12.08□□□□□ -0.485e-7■□□□□ 8.8
SNRNP200-201ENST00000323853 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 USP17L21D6R901 530 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 PPP6R2O75170 966 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 SCG2P13521 617 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 TCP10Q12799 353 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 RAB3IL1Q8TBN0 382 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 IGSF1Q8N6C5 1336 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
SNRNP200-201ENST00000323853 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms