RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SLC5A1P13866 664 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 NDUFA8P51970 172 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 BIRC3Q13489 604 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 TAF11Q15544 211 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 GSDMBQ8TAX9 411 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 ETAA1Q9NY74 926 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 ANGEL1Q9UNK9 670 aaKnown RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 KIF1AQ12756 1690 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 STX2P32856 288 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 TBC1D8BQ0IIM8 1120 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 APLFQ8IW19 511 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 TEX9Q8N6V9 391 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 PUS7Q96PZ0 661 aaKnown RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 DDX23Q9BUQ8 820 aaKnown RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 MROH2AA6NES4 1674 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 KIAA0232Q92628 1395 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 RPS6KA1Q15418 735 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 FNBP4Q8N3X1 1017 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 OR8K1Q8NGG5 319 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 VWA3AA6NCI4 1184 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 CHRM1P11229 460 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 TMED1Q13445 227 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 USP37Q86T82 979 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 VPS16Q9H269 839 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 FAF1Q9UNN5 650 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 CABP4P57796 275 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 DTHD1Q6ZMT9 781 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 VIPAS39Q9H9C1 493 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 CHPF2Q9P2E5 772 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 N4BP2Q86UW6 1770 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 CFAP73A6NFT4 308 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 TBCAO75347 108 aaKnown RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 GNAT2P19087 354 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 PSMC4P43686 418 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 MORC3Q14149 939 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 PEX26Q7Z412 305 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 VSTM4Q8IW00 320 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 SYCP3Q8IZU3 236 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 EDC4Q6P2E9 1401 aaKnown RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 ST5P78524 1137 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 SUGP1Q8IWZ8 645 aaKnown RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 ESR2Q92731 530 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 OSBPL5Q9H0X9 879 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-201ENST00000322213 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 MCM7P33993 719 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 LONRF3Q496Y0 759 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 POLR3EQ9NVU0 708 aa7.79□□□□□ -1.16
SMC1A-201ENST00000322213 GGCXP38435 758 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 RNASELQ05823 741 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 DEUP1Q05D60 604 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 SPTY2D1Q68D10 685 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 SLC30A9Q6PML9 568 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 UBE3BQ7Z3V4 1068 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 PAIP2BQ9ULR5 123 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 TRIM35Q9UPQ4 493 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ABCA8O94911 1581 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 RASSF10A6NK89 507 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ATP5HO75947 161 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 NNTQ13423 1086 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC14Q49A88 953 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 C11orf57Q6ZUT1 292 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ARHGEF40Q8TER5 1519 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 FAM212AQ96EL1 285 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 STXBP3O00186 592 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 MAP3K7O43318 606 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 TADA3O75528 432 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 TROVE2P10155 538 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CPA1P15085 419 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 PFKFB1P16118 471 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 GYS2P54840 703 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 C2CD5Q86YS7 1000 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 MGARPQ8TDB4 240 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 RUNDC3BQ96NL0 473 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 POLKQ9UBT6 870 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 TARBP1Q13395 1621 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 PLEKHG2Q9H7P9 1386 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CALM1P0DP23 149 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CALM2P0DP24 149 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CALM3P0DP25 149 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 MIS12Q9H081 205 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 EIF3BP55884 814 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 PSMB7Q99436 277 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 SPZ1Q9BXG8 430 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 SFMBT2Q5VUG0 894 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ZC3H18Q86VM9 953 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CTNND1O60716 968 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 PSMD7P51665 324 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 NLRP2Q9NX02 1062 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ANGPTL2Q9UKU9 493 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ABCC10Q5T3U5 1492 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 FAM208AQ9UK61 1670 aaKnown RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ASIC2Q16515 512 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 RCSD1Q6JBY9 416 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 ST13P4Q8IZP2 240 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 NME8Q8N427 588 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms