RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 NDUFA10O95299 355 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 GGCXP38435 758 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 COPB1P53618 953 aaKnown RBP20.16■□□□□ 0.82
PRKCB-202ENST00000321728 SH3RF1Q7Z6J0 888 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 CRACR2BQ8N4Y2 399 aaPredicted RBP20.16■□□□□ 0.82
PRKCB-202ENST00000321728 STRBPQ96SI9 672 aaKnown RBP20.16■□□□□ 0.82
PRKCB-202ENST00000321728 SAR1BQ9Y6B6 198 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 C1orf167Q5SNV9 1468 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 MST1RQ04912 1400 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 ATP1A1P05023 1023 aaKnown RBP20.16■□□□□ 0.82
PRKCB-202ENST00000321728 GUCY2CP25092 1073 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 WTAPQ15007 396 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 GSPT2Q8IYD1 628 aaKnown RBP20.16■□□□□ 0.82
PRKCB-202ENST00000321728 BLZF1Q9H2G9 400 aa20.16■□□□□ 0.82
PRKCB-202ENST00000321728 LIMA1Q9UHB6 759 aaKnown RBP20.16■□□□□ 0.82
PRKCB-202ENST00000321728 TRIM14Q14142 442 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 MFSD6Q6ZSS7 791 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 TADA2BQ86TJ2 420 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 TFR2Q9UP52 801 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 REXO2Q9Y3B8 237 aaKnown RBP20.15■□□□□ 0.82
PRKCB-202ENST00000321728 TRPM3Q9HCF6 1732 aaPredicted RBP20.15■□□□□ 0.82
PRKCB-202ENST00000321728 CDHR2Q9BYE9 1310 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 UBXN1Q04323 297 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
PRKCB-202ENST00000321728 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 CAGE1Q8TC20 777 aa20.15■□□□□ 0.82
PRKCB-202ENST00000321728 ERICH2A1L162 156 aa20.14■□□□□ 0.82
PRKCB-202ENST00000321728 PSMD14O00487 310 aa20.14■□□□□ 0.82
PRKCB-202ENST00000321728 CCDC122Q5T0U0 273 aa20.14■□□□□ 0.82
PRKCB-202ENST00000321728 LDHAL6AQ6ZMR3 332 aa20.14■□□□□ 0.82
PRKCB-202ENST00000321728 CNNM2Q9H8M5 875 aa20.14■□□□□ 0.82
PRKCB-202ENST00000321728 LAMB4A4D0S4 1761 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 MYO5AQ9Y4I1 1855 aaKnown RBP20.14■□□□□ 0.81
PRKCB-202ENST00000321728 A0A087WUV0 522 aaPredicted RBP20.14■□□□□ 0.81
PRKCB-202ENST00000321728 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 KCNJ18B7U540 433 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 PES1O00541 588 aaKnown RBP20.14■□□□□ 0.81
PRKCB-202ENST00000321728 SPAG1Q07617 926 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 KCNJ12Q14500 433 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 AKNAD1Q5T1N1 836 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 FAM76AQ8TAV0 307 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 KRT23Q9C075 422 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 TACC3Q9Y6A5 838 aa20.14■□□□□ 0.81
PRKCB-202ENST00000321728 EIF5P55010 431 aaKnown RBP20.13■□□□□ 0.81
PRKCB-202ENST00000321728 TCP11X2Q5H9J9 407 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 TOM1L2Q6ZVM7 507 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 HAUS4Q9H6D7 363 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
PRKCB-202ENST00000321728 ATRNO75882 1429 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 CNNM1Q9NRU3 951 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 VPS54Q9P1Q0 977 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 KAT6BQ8WYB5 2073 aa20.13■□□□□ 0.81
PRKCB-202ENST00000321728 LRRC10BA6NIK2 292 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
PRKCB-202ENST00000321728 SNAP23O00161 211 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 MBD4O95243 580 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 CCT5P48643 541 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 FAM107BQ9H098 131 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 MAPK8IP1Q9UQF2 711 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
PRKCB-202ENST00000321728 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 ATF3P18847 181 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 PAK1Q13153 545 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 TSR1Q2NL82 804 aaKnown RBP20.12■□□□□ 0.81
PRKCB-202ENST00000321728 EARS2Q5JPH6 523 aaKnown RBP20.12■□□□□ 0.81
PRKCB-202ENST00000321728 FANCBQ8NB91 859 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
PRKCB-202ENST00000321728 SELENOOQ9BVL4 669 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 KAT14Q9H8E8 782 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
PRKCB-202ENST00000321728 TARSL2A2RTX5 802 aaKnown RBP20.11■□□□□ 0.81
PRKCB-202ENST00000321728 CKAP4Q07065 602 aaKnown RBP20.11■□□□□ 0.81
PRKCB-202ENST00000321728 ZNF174Q15697 407 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 KIAA1328Q86T90 577 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 OR8K1Q8NGG5 319 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 NELFBQ8WX92 580 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 JAKMIP2Q96AA8 810 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 HINFPQ9BQA5 517 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 RABEP2Q9H5N1 569 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 ARMT1Q9H993 441 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 RWDD2AQ9UIY3 292 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 TTC26A0AVF1 554 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 CPP00450 1065 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 MYBL2P10244 700 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 ALX1Q15699 326 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 FERMT2Q96AC1 680 aa20.11■□□□□ 0.81
PRKCB-202ENST00000321728 GEMIN8Q9NWZ8 242 aaKnown RBP20.11■□□□□ 0.81
PRKCB-202ENST00000321728 hCG_1642624A0A1W2PR95 340 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 GOLGA6BA6NDN3 693 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 XBP1P17861 261 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 LIG3P49916 1009 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 E2F4Q16254 413 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.1■□□□□ 0.81
PRKCB-202ENST00000321728 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
PRKCB-202ENST00000321728 LUC7L2Q9Y383 392 aaKnown RBP20.1■□□□□ 0.81
PRKCB-202ENST00000321728 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 AKAP11Q9UKA4 1901 aa20.1■□□□□ 0.81
PRKCB-202ENST00000321728 TCRBV5S4A2TA0A5A2 114 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms