RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 AXDND1Q5T1B0 1012 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 DDIT3P35638 169 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 MIGA2Q7L4E1 593 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 CCDC102AQ96A19 550 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 CAPZA3Q96KX2 299 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 PIGSQ96S52 555 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 PSMB7Q99436 277 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 BAG1Q99933 345 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 TRAF5O00463 557 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 NTSR2O95665 410 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 MMP1P03956 469 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 RUFY1Q96T51 708 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 CD209Q9NNX6 404 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-201ENST00000321105 FDPSP14324 419 aaKnown RBP12.4□□□□□ -0.42
TOP3A-201ENST00000321105 NOP2P46087 812 aaKnown RBP12.4□□□□□ -0.42
TOP3A-201ENST00000321105 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-201ENST00000321105 NLGN1Q8N2Q7 840 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 CSGALNACT2Q8N6G5 542 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 CYP4A11Q02928 519 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 PPARDQ03181 441 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 TBC1D8BQ0IIM8 1120 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-201ENST00000321105 KIF20BQ96Q89 1820 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 C21orf2O43822 256 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 TBCAO75347 108 aaKnown RBP12.4□□□□□ -0.42
TOP3A-201ENST00000321105 LIFRP42702 1097 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 NCAPH2Q6IBW4 605 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 TBC1D22AQ8WUA7 517 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
TOP3A-201ENST00000321105 SYNRGQ9UMZ2 1314 aa12.4□□□□□ -0.43
TOP3A-201ENST00000321105 SSR1P43307 286 aaKnown RBP12.39□□□□□ -0.43
TOP3A-201ENST00000321105 ST3GAL1Q11201 340 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 ZNF569Q5MCW4 686 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 TMCO3Q6UWJ1 677 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 SPAG5Q96R06 1193 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 LEMD3Q9Y2U8 911 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 ODF2Q5BJF6 829 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 SAMSN1Q9NSI8 373 aaKnown RBP12.39□□□□□ -0.43
TOP3A-201ENST00000321105 RRP9O43818 475 aaKnown RBP12.39□□□□□ -0.43
TOP3A-201ENST00000321105 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-201ENST00000321105 GPSM2P81274 684 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 CALCRLQ16602 461 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 HERC4Q5GLZ8 1057 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-201ENST00000321105 CABP7Q86V35 215 aa12.39□□□□□ -0.43
TOP3A-201ENST00000321105 SRRTQ9BXP5 876 aaKnown RBP12.39□□□□□ -0.43
TOP3A-201ENST00000321105 CHRNA5P30532 468 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 ADCY7P51828 1080 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
TOP3A-201ENST00000321105 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 TXNRD1Q16881 649 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 DCAF17Q5H9S7 520 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-201ENST00000321105 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 MACROD2A1Z1Q3 448 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 KRT9P35527 623 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 GRM1Q13255 1194 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 UBE2SQ16763 222 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 PTPROQ16827 1216 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-201ENST00000321105 SV2BQ7L1I2 683 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 SERPINB13Q9UIV8 391 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 CDK8P49336 464 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
TOP3A-201ENST00000321105 NELFBQ8WX92 580 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-201ENST00000321105 FAM207AQ9NSI2 230 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-201ENST00000321105 OVOS2A0A0G2JMS6 1433 aa12.38□□□□□ -0.43
TOP3A-201ENST00000321105 TMCO5BA8MYB1 307 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PRR16Q569H4 304 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 MLKLQ8NB16 471 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PLEKHA4Q9H4M7 779 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PAK1Q13153 545 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 MCM6Q14566 821 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 ADGRA1Q86SQ6 560 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
TOP3A-201ENST00000321105 PCDHA1Q9Y5I3 950 aa12.37□□□□□ -0.43
TOP3A-201ENST00000321105 SLIT1O75093 1534 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms