RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
PRPF18-201ENST00000320054 FANCBQ8NB91 859 aa15.89■□□□□ 0.13
PRPF18-201ENST00000320054 GMCL1P1Q8NEA9 526 aa15.89■□□□□ 0.13
PRPF18-201ENST00000320054 RBM46Q8TBY0 533 aaKnown RBP15.89■□□□□ 0.13
PRPF18-201ENST00000320054 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
PRPF18-201ENST00000320054 AS3MTQ9HBK9 375 aa15.89■□□□□ 0.13
PRPF18-201ENST00000320054 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
PRPF18-201ENST00000320054 SNCAIPQ9Y6H5 919 aa15.89■□□□□ 0.13
PRPF18-201ENST00000320054 PASKQ96RG2 1323 aa15.89■□□□□ 0.13
PRPF18-201ENST00000320054 LOC285556D6RIA3 1793 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 CCDC196A0A1B0GTZ2 297 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 A0A1W2PRG0 241 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 GOLGA8AA7E2F4 631 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 DHX16O60231 1041 aaKnown RBP15.88■□□□□ 0.13
PRPF18-201ENST00000320054 TOMM70O94826 608 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 FMR1Q06787 632 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRPF18-201ENST00000320054 ST3GAL1Q11201 340 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 SCRN1Q12765 414 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 STK3Q13188 491 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 GRM4Q14833 912 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 LRRC47Q8N1G4 583 aaKnown RBP15.88■□□□□ 0.13
PRPF18-201ENST00000320054 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 NECAB1Q8N987 351 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
PRPF18-201ENST00000320054 MYL10Q9BUA6 226 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 ZNF408Q9H9D4 720 aa15.88■□□□□ 0.13
PRPF18-201ENST00000320054 GBA2Q9HCG7 927 aaPredicted RBP15.88■□□□□ 0.13
PRPF18-201ENST00000320054 RBM28Q9NW13 759 aaKnown RBP15.88■□□□□ 0.13
PRPF18-201ENST00000320054 PARP14Q460N5 1801 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 CELF2O95319 508 aaKnown RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 SNHG28P0DPA3 235 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 KIF5BP33176 963 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 RTN1Q16799 776 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 MOB2Q70IA6 237 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 CCDC83Q8IWF9 413 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 ZNF784Q8NCA9 323 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 ACER1Q8TDN7 264 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 NUP133Q8WUM0 1156 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
PRPF18-201ENST00000320054 FAM217BQ9NTX9 383 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 DAXXQ9UER7 740 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-201ENST00000320054 SPDYE5A6NIY4 337 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 F5H6K3 240 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 UBE2Q2LH0YL09 131 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 PDHBP11177 359 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 ECE1P42892 770 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 GNAQP50148 359 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 KLRC3Q07444 240 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 CST9Q5W186 159 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 ERO1BQ86YB8 467 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 ZNF280CQ8ND82 737 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 DCAF4Q8WV16 495 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 GMCL1Q96IK5 515 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 LLPHQ9BRT6 129 aaKnown RBP15.86■□□□□ 0.13
PRPF18-201ENST00000320054 GOPCQ9HD26 462 aa15.86■□□□□ 0.13
PRPF18-201ENST00000320054 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
PRPF18-201ENST00000320054 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
PRPF18-201ENST00000320054 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
PRPF18-201ENST00000320054 C19orf81C9J6K1 198 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 NDUFB10O96000 172 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
PRPF18-201ENST00000320054 RXRAP19793 462 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 CDC27P30260 824 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 USP14P54578 494 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 PPATQ06203 517 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 FSTL1Q12841 308 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 SLFN13Q68D06 897 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 CPLX2Q6PUV4 134 aaKnown RBP15.85■□□□□ 0.13
PRPF18-201ENST00000320054 CCDC84Q86UT8 332 aaPredicted RBP15.85■□□□□ 0.13
PRPF18-201ENST00000320054 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 VCPKMTQ9H867 229 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 NCOA5Q9HCD5 579 aaKnown RBP15.85■□□□□ 0.13
PRPF18-201ENST00000320054 MAD2L2Q9UI95 211 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 AFG3L2Q9Y4W6 797 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 ZHX2Q9Y6X8 837 aa15.85■□□□□ 0.13
PRPF18-201ENST00000320054 CPLX1O14810 134 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 CDKL5O76039 1030 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
PRPF18-201ENST00000320054 IFNAR1P17181 557 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 SMARCA1P28370 1054 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 ADD1P35611 737 aaKnown RBP15.84■□□□□ 0.13
PRPF18-201ENST00000320054 BACE1P56817 501 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 SPP2Q13103 211 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 NTRK3Q16288 839 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 GPATCH4Q5T3I0 446 aaKnown RBP15.84■□□□□ 0.13
PRPF18-201ENST00000320054 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 SMARCC2Q8TAQ2 1214 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 LPAR1Q92633 364 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 FEZ1Q99689 392 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 LZTS2Q9BRK4 669 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 ELP3Q9H9T3 547 aa15.84■□□□□ 0.13
PRPF18-201ENST00000320054 CTDNEP1O95476 244 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms