RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 HOXC10Q9NYD6 342 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 RLFQ13129 1914 aa17.23■□□□□ 0.35
RPP40-201ENST00000319533 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 ZNF236Q9UL36 1845 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 COG2Q14746 738 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 SIRT2Q8IXJ6 389 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 SHCBP1Q8NEM2 672 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 LPAR1Q92633 364 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 SWAP70Q9UH65 585 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 DDX20Q9UHI6 824 aaKnown RBP17.22■□□□□ 0.35
RPP40-201ENST00000319533 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
RPP40-201ENST00000319533 A0A0G2JMZ2 1700 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 GOLIM4O00461 696 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 STRNO43815 780 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 MS4A1P11836 297 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 WDR78Q5VTH9 848 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 OLFML2BQ68BL8 750 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 TMEM179Q6ZVK1 233 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 SIAH1Q8IUQ4 282 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
RPP40-201ENST00000319533 MOV10L1Q9BXT6 1211 aaKnown RBP17.21■□□□□ 0.35
RPP40-201ENST00000319533 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
RPP40-201ENST00000319533 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
RPP40-201ENST00000319533 MB21D1Q8N884 522 aa17.2■□□□□ 0.34
RPP40-201ENST00000319533 TRPV1Q8NER1 839 aa17.2■□□□□ 0.34
RPP40-201ENST00000319533 UBE2OQ9C0C9 1292 aaKnown RBP17.2■□□□□ 0.34
RPP40-201ENST00000319533 SPATC1LQ9H0A9 340 aa17.2■□□□□ 0.34
RPP40-201ENST00000319533 ZBTB40Q9NUA8 1239 aa17.2■□□□□ 0.34
RPP40-201ENST00000319533 DNM1LO00429 736 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 HMMRO75330 724 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
RPP40-201ENST00000319533 CYP2D6P10635 497 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 CYBAP13498 195 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 CYP2C19P33261 490 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 ADD2P35612 726 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
RPP40-201ENST00000319533 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 TMX2Q9Y320 296 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 DNAH12Q6ZR08 3092 aa17.19■□□□□ 0.34
RPP40-201ENST00000319533 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
RPP40-201ENST00000319533 ATP5JP18859 108 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 ADORA2AP29274 412 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 DEFB123Q8N688 67 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 SENP6Q9GZR1 1112 aaPredicted RBP17.18■□□□□ 0.34
RPP40-201ENST00000319533 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
RPP40-201ENST00000319533 COBLO75128 1261 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 ERCC3P19447 782 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 CNGA1P29973 690 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 DPP9Q86TI2 863 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 CCDC17Q96LX7 622 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 MROH8Q9H579 483 aa17.17■□□□□ 0.34
RPP40-201ENST00000319533 PRKAB2O43741 272 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 AKR1B1P15121 316 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 C12orf60Q5U649 245 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 HAUS7Q99871 368 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 MTMR10Q9NXD2 777 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 STXBP5LQ9Y2K9 1186 aa17.16■□□□□ 0.34
RPP40-201ENST00000319533 A0A0C4DFX4 3053 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 APBB1O00213 710 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
RPP40-201ENST00000319533 SEPT4O43236 478 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 MBD4O95243 580 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 CDK8P49336 464 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
RPP40-201ENST00000319533 ICA1Q05084 483 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 UBE3CQ15386 1083 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 SLFNL1Q499Z3 407 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 Q7L0L9 218 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 ARRDC4Q8NCT1 418 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 ATG4CQ96DT6 458 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.15■□□□□ 0.34
RPP40-201ENST00000319533 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
RPP40-201ENST00000319533 PARP14Q460N5 1801 aa17.14■□□□□ 0.34
RPP40-201ENST00000319533 MYH8P13535 1937 aa17.14■□□□□ 0.33
RPP40-201ENST00000319533 FLOT1O75955 427 aa17.14■□□□□ 0.33
RPP40-201ENST00000319533 FAM109BQ6ICB4 259 aaPredicted RBP17.14■□□□□ 0.33
RPP40-201ENST00000319533 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
RPP40-201ENST00000319533 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
RPP40-201ENST00000319533 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
RPP40-201ENST00000319533 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
RPP40-201ENST00000319533 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
RPP40-201ENST00000319533 USP17L12C9JPN9 530 aa17.13■□□□□ 0.33
RPP40-201ENST00000319533 USP17L21D6R901 530 aa17.13■□□□□ 0.33
RPP40-201ENST00000319533 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
RPP40-201ENST00000319533 SLC25A27O95847 323 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms