RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 POTEDQ86YR6 584 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 C2CD5Q86YS7 1000 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 SCYL1Q96KG9 808 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 MED10Q9BTT4 135 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 COX16Q9P0S2 106 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 RBBP5Q15291 538 aaKnown RBP23.15■■□□□ 1.3
KDM3B-201ENST00000314358 XAGE2Q96GT9 111 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 ARHGEF10LQ9HCE6 1279 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 DENND2AQ9ULE3 1009 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 MX2P20592 715 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 CABP7Q86V35 215 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 RSAD2Q8WXG1 361 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 KRT12Q99456 494 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 DNM3Q9UQ16 869 aa23.15■■□□□ 1.3
KDM3B-201ENST00000314358 GPAA1O43292 621 aa23.14■■□□□ 1.3
KDM3B-201ENST00000314358 DPH5Q9H2P9 285 aa23.14■■□□□ 1.3
KDM3B-201ENST00000314358 KMT5BQ4FZB7 885 aa23.14■■□□□ 1.3
KDM3B-201ENST00000314358 CCDC13Q8IYE1 715 aa23.14■■□□□ 1.3
KDM3B-201ENST00000314358 RIOK1Q9BRS2 568 aaKnown RBP23.14■■□□□ 1.3
KDM3B-201ENST00000314358 TPX2Q9ULW0 747 aaKnown RBP23.14■■□□□ 1.3
KDM3B-201ENST00000314358 FAM98CQ17RN3 349 aaKnown RBP23.14■■□□□ 1.29
KDM3B-201ENST00000314358 RUFY4Q6ZNE9 571 aa23.14■■□□□ 1.29
KDM3B-201ENST00000314358 METTL13Q8N6R0 699 aa23.14■■□□□ 1.29
KDM3B-201ENST00000314358 CCNL1Q9UK58 526 aaPredicted RBP23.14■■□□□ 1.29
KDM3B-201ENST00000314358 HIBADHP31937 336 aaKnown RBP23.14■■□□□ 1.29
KDM3B-201ENST00000314358 PAK2Q13177 524 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 CXorf38Q8TB03 319 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 ZMYM3Q14202 1370 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 CASP2P42575 452 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 MAPKAPK5Q8IW41 473 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 FOXD4Q12950 439 aaPredicted RBP23.13■■□□□ 1.29
KDM3B-201ENST00000314358 KAZNQ674X7 775 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 CFAP221Q4G0U5 840 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 MICAL1Q8TDZ2 1067 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 EYA3Q99504 573 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 CACYBPQ9HB71 228 aaKnown RBP23.13■■□□□ 1.29
KDM3B-201ENST00000314358 MAGED2Q9UNF1 606 aaPredicted RBP23.13■■□□□ 1.29
KDM3B-201ENST00000314358 TRIM35Q9UPQ4 493 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 CAPN7Q9Y6W3 813 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.13■■□□□ 1.29
KDM3B-201ENST00000314358 KIF22Q14807 665 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 USH1CQ9Y6N9 552 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 SOS1Q07889 1333 aaPredicted RBP23.13■■□□□ 1.29
KDM3B-201ENST00000314358 ADCY7P51828 1080 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 KRT81Q14533 505 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 TRPM2O94759 1503 aa23.13■■□□□ 1.29
KDM3B-201ENST00000314358 TNNI3KQ59H18 835 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 CEP128Q6ZU80 1094 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 PHLDB2Q86SQ0 1253 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 MRPL46Q9H2W6 279 aaKnown RBP23.12■■□□□ 1.29
KDM3B-201ENST00000314358 FPGT-TNNI3KV9GXZ4 949 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 WDR62O43379 1518 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 VAMP4O75379 141 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 CTNNA1P35221 906 aaKnown RBP23.12■■□□□ 1.29
KDM3B-201ENST00000314358 IFIH1Q9BYX4 1025 aaKnown RBP23.12■■□□□ 1.29
KDM3B-201ENST00000314358 PHACTR3Q96KR7 559 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 GBP5Q96PP8 586 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 KCNK3O14649 394 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 RGS16O15492 202 aaPredicted RBP23.12■■□□□ 1.29
KDM3B-201ENST00000314358 STK32BQ9NY57 414 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 MAP3K5Q99683 1374 aa23.12■■□□□ 1.29
KDM3B-201ENST00000314358 GNGT1P63211 74 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 INTS4Q96HW7 963 aaKnown RBP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 RIPOR2Q9Y4F9 1068 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 SPECC1L-ADORA2AF8WAN1 911 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 FAM102BQ5T8I3 360 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 SRGAP1Q7Z6B7 1085 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 ARHGAP24Q8N264 748 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 NAP1L4Q99733 375 aaKnown RBP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 CARD10Q9BWT7 1032 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 AZI2Q9H6S1 392 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 TUBBP07437 444 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 TGFBRAP1Q8WUH2 860 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 TCOF1Q13428 1488 aaKnown RBP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 ATF7P17544 494 aaPredicted RBP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 SLC1A4P43007 532 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 COG7P83436 770 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 SESTD1Q86VW0 696 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 SKA2Q8WVK7 121 aaPredicted RBP23.11■■□□□ 1.29
KDM3B-201ENST00000314358 POMGNT1Q8WZA1 660 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 SERTAD1Q9UHV2 236 aa23.11■■□□□ 1.29
KDM3B-201ENST00000314358 CUTAO60888 179 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 BCRP11274 1271 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 LGSNQ5TDP6 509 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 MORC4Q8TE76 937 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.1■■□□□ 1.29
KDM3B-201ENST00000314358 FRMPD2Q68DX3 1309 aaPredicted RBP23.1■■□□□ 1.29
KDM3B-201ENST00000314358 YARSP54577 528 aaKnown RBP23.1■■□□□ 1.29
KDM3B-201ENST00000314358 ADCY1Q08828 1119 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.1■■□□□ 1.29
KDM3B-201ENST00000314358 NUP58Q9BVL2 599 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 IVNS1ABPQ9Y6Y0 642 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 CNBD1Q8NA66 436 aa23.1■■□□□ 1.29
KDM3B-201ENST00000314358 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
KDM3B-201ENST00000314358 NAA35Q5VZE5 725 aa23.09■■□□□ 1.29
KDM3B-201ENST00000314358 SH2D4AQ9H788 454 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms