RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 VCAM1P19320 739 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 CRHR2Q13324 411 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 STOX1Q6ZVD7 989 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 ZFYVE28Q9HCC9 887 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 ZSWIM5Q9P217 1185 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 ZKSCAN1P17029 563 aaPredicted RBP20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 PARK7Q99497 189 aaKnown RBP20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 UBAC1Q9BSL1 405 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 PNMA3Q9UL41 463 aa20.61■□□□□ 0.89
SWSAP1-201ENST00000312423 OSBPP22059 807 aa20.6■□□□□ 0.89
SWSAP1-201ENST00000312423 IRX3P78415 501 aaPredicted RBP20.6■□□□□ 0.89
SWSAP1-201ENST00000312423 LPAR1Q92633 364 aa20.6■□□□□ 0.89
SWSAP1-201ENST00000312423 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
SWSAP1-201ENST00000312423 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
SWSAP1-201ENST00000312423 SLC45A1Q9Y2W3 748 aa20.6■□□□□ 0.89
SWSAP1-201ENST00000312423 CYP2C8P10632 490 aa20.59■□□□□ 0.89
SWSAP1-201ENST00000312423 SMCR8Q8TEV9 937 aaPredicted RBP20.59■□□□□ 0.89
SWSAP1-201ENST00000312423 TANGO6Q9C0B7 1094 aa20.59■□□□□ 0.89
SWSAP1-201ENST00000312423 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
SWSAP1-201ENST00000312423 MTMR7Q9Y216 660 aa20.59■□□□□ 0.89
SWSAP1-201ENST00000312423 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 MCCP23508 829 aa20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 KIAA1755Q5JYT7 1200 aa20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 MKL1Q969V6 931 aa20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 CHMP4CQ96CF2 233 aa20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 ZSCAN10Q96SZ4 725 aaPredicted RBP20.58■□□□□ 0.89
SWSAP1-201ENST00000312423 USP17L15C9J2P7 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L13C9JLJ4 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L11C9JVI0 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L18D6R9N7 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L22D6RA61 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L17D6RBQ6 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L19D6RCP7 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L20D6RJB6 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 F5H6K3 240 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 TNKSO95271 1327 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 HSPA4P34932 840 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 KLRC3Q07444 240 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 USP17L24Q0WX57 530 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 ASCC2Q9H1I8 757 aaPredicted RBP20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 R3HDMLQ9H3Y0 253 aa20.58■□□□□ 0.88
SWSAP1-201ENST00000312423 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 NDUFB10O96000 172 aa20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 TOP1P11387 765 aaKnown RBP20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 HOXA7P31268 230 aaPredicted RBP20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 CHST3Q7LGC8 479 aa20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 RASEFQ8IZ41 740 aa20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 SYNPO2Q9UMS6 1093 aa20.57■□□□□ 0.88
SWSAP1-201ENST00000312423 ERICH2A1L162 156 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 EPB41L2O43491 1005 aaKnown RBP20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 HSPA8P11142 646 aaKnown RBP20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 KRT32Q14532 448 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 SART3Q15020 963 aaKnown RBP20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 GMCL1P1Q8NEA9 526 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 TTC14Q96N46 770 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 NUP88Q99567 741 aaPredicted RBP20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 TMEM47Q9BQJ4 181 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
SWSAP1-201ENST00000312423 TLR2O60603 784 aa20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 LBX1P52954 281 aa20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 C8orf34Q49A92 452 aa20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 FAM83BQ5T0W9 1011 aa20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 MB21D2Q8IYB1 491 aaPredicted RBP20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 ENAHQ8N8S7 591 aaPredicted RBP20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 CPA4Q9UI42 421 aa20.55■□□□□ 0.88
SWSAP1-201ENST00000312423 IFIT3O14879 490 aaKnown RBP20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 MCM5P33992 734 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 IFIT1BQ5T764 474 aaKnown RBP20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 CATSPERGQ6ZRH7 1159 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 DGKHQ86XP1 1220 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 NEK1Q96PY6 1258 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 KAT14Q9H8E8 782 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 GPR25O00155 361 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 PRC1O43663 620 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 FLOT1O75955 427 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 NOVP48745 357 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 ADCK5Q3MIX3 580 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 TSGA10IPQ3SY00 556 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 P2RX7Q99572 595 aaKnown RBP20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 SNX14Q9Y5W7 946 aa20.54■□□□□ 0.88
SWSAP1-201ENST00000312423 SLC1A4P43007 532 aa20.53■□□□□ 0.88
SWSAP1-201ENST00000312423 HERVK_113P62684 666 aa20.53■□□□□ 0.88
SWSAP1-201ENST00000312423 TMEM67Q5HYA8 995 aa20.53■□□□□ 0.88
SWSAP1-201ENST00000312423 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
SWSAP1-201ENST00000312423 SEC24BO95487 1268 aa20.52■□□□□ 0.88
SWSAP1-201ENST00000312423 ANTXR2P58335 489 aa20.52■□□□□ 0.88
SWSAP1-201ENST00000312423 WTAPQ15007 396 aa20.52■□□□□ 0.88
SWSAP1-201ENST00000312423 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
SWSAP1-201ENST00000312423 PNMA1Q8ND90 353 aa20.52■□□□□ 0.88
SWSAP1-201ENST00000312423 KCNB2Q92953 911 aa20.52■□□□□ 0.88
SWSAP1-201ENST00000312423 ADGRA2Q96PE1 1338 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms